Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS05850 and ABI39_RS05855 are separated by 181 nucleotidesABI39_RS05855 and ABI39_RS05860 are separated by 93 nucleotidesABI39_RS05860 and ABI39_RS05865 are separated by 101 nucleotidesABI39_RS05865 and ABI39_RS05870 are separated by 80 nucleotides ABI39_RS05850: ABI39_RS05850 - DUF4884 domain-containing protein, at 1,615,389 to 1,615,658 _RS05850 ABI39_RS05855: ABI39_RS05855 - rubrerythrin family protein, at 1,615,840 to 1,616,418 _RS05855 ABI39_RS05860: ABI39_RS05860 - response regulator, at 1,616,512 to 1,620,498 _RS05860 ABI39_RS05865: ABI39_RS05865 - hypothetical protein, at 1,620,600 to 1,621,940 _RS05865 ABI39_RS05870: ABI39_RS05870 - RagB/SusD family nutrient uptake outer membrane protein, at 1,622,021 to 1,623,793 _RS05870
Group Condition ABI39_RS05850 ABI39_RS05855 ABI39_RS05860 ABI39_RS05865 ABI39_RS05870
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.6 -0.1 -0.1 -0.3 -0.1
carbon source NAG 2.5 mg/ml (C) -0.5 -0.3 -0.1 +0.1 -0.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 -0.5 -0.1 +0.3 -0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.9 +0.4 -0.1 -0.2 +0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.8 +0.3 -0.3 +0.5 -0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.6 -0.4 +0.1 +0.5 +0.0
carbon source Beta-Lactose 2.5 mg/ml (C) -0.7 +0.0 -0.1 +0.4 -0.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.8 -0.2 -0.2 +0.2 -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.2 -0.0 -0.3 +0.6 -0.1
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.2 +0.4 -0.3 +0.3 -0.1
carbon source Glucose-6-Phosphate (C) +0.2 +0.6 -0.1 -0.2 -0.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.4 +0.3 -0.1 +0.3 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.3 +0.8 -0.2 +0.4 -0.0
carbon source Galactan from Potato (C) +0.4 +0.3 -0.0 -0.3 +0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.3 +0.3 -0.3 +0.6 -0.1
carbon source amylopectin from maize (C) +0.8 +0.3 -0.2 -0.1 +0.0
carbon source Amylopectin from Potato (C) +0.7 +0.2 -0.1 -0.1 +0.1
carbon source Glycogen; filtered 2.5 mg/ml (C) +0.4 +0.4 -0.1 +0.3 -0.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.4 +0.4 -0.0 +0.4 -0.3
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.5 +0.2 -0.1 +0.4 +0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.4 +0.4 -0.1 +0.5 -0.1
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.6 +0.4 -0.2 +0.4 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.7 +0.1 -0.0 +0.4 +0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.3 +0.9 -0.1 +0.1 +0.0
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.3 +0.4 -0.1 +0.8 -0.1
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.2 +1.0 -0.1 +0.3 -0.1
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -0.1 +1.3 -0.1 +0.3 -0.1
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.1 +1.1 +0.0 +0.4 -0.0
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.2 +1.4 -0.0 +0.3 -0.1
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.4 +0.9 +0.0 +0.5 +0.0
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