Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS05830 and ABI39_RS05835 are separated by 26 nucleotidesABI39_RS05835 and ABI39_RS05840 are separated by 12 nucleotidesABI39_RS05840 and ABI39_RS05845 are separated by 96 nucleotidesABI39_RS05845 and ABI39_RS05850 are separated by 98 nucleotides ABI39_RS05830: ABI39_RS05830 - HlyD family efflux transporter periplasmic adaptor subunit, at 1,608,812 to 1,609,978 _RS05830 ABI39_RS05835: ABI39_RS05835 - peptidase domain-containing ABC transporter, at 1,610,005 to 1,612,179 _RS05835 ABI39_RS05840: ABI39_RS05840 - TolC family protein, at 1,612,192 to 1,613,511 _RS05840 ABI39_RS05845: ABI39_RS05845 - sulfate permease, at 1,613,608 to 1,615,290 _RS05845 ABI39_RS05850: ABI39_RS05850 - DUF4884 domain-containing protein, at 1,615,389 to 1,615,658 _RS05850
Group Condition ABI39_RS05830 ABI39_RS05835 ABI39_RS05840 ABI39_RS05845 ABI39_RS05850
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.6 +0.1 -0.2 -0.7 -0.5
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.8 -0.0 +0.1 -0.2 -0.8
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.6 +0.1 -0.1 -0.1 -0.9
carbon source Beta-Lactose 2.5 mg/ml (C) -0.5 +0.1 -0.2 -0.1 -0.7
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 -0.1 -0.2 +0.0 -0.6
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.7 -0.1 -0.1 -0.1 +0.1
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.7 -0.2 +0.1 -0.1 +0.2
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.3 +0.1 -0.1 +0.1 -0.6
carbon source NAG 2.5 mg/ml (C) -0.5 +0.3 -0.0 -0.0 -0.5
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.7 +0.0 +0.1 -0.1 +0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.6 -0.1 +0.2 -0.3 +0.4
carbon source Galactan from Potato (C) +0.1 -0.4 +0.1 -0.2 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.3 -0.1 +0.2 -0.1 +0.4
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.6 +0.1 +0.3 -0.1 +0.3
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.4 -0.1 +0.2 -0.1 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.6 -0.0 +0.3 -0.0 +0.6
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.6 +0.0 +0.4 -0.1 +0.4
carbon source Galactan from Potato (C) +0.2 -0.4 -0.1 +0.1 +0.4
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.7 -0.2 -0.1 -0.4 +0.3
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.0 -0.0 +0.0 -0.3 +0.8
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.4 +0.1 +0.4 -0.2 +0.7
carbon source amylopectin from maize (C) +0.6 -0.2 -0.3 -0.3 +0.7
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.4 -0.1 -0.0 -0.2 +0.6
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.7 +0.0 -0.1 -0.2 +0.2
carbon source Amylopectin from Potato (C) +0.5 +0.1 -0.1 -0.2 +0.5
carbon source B-glucan from yeast (C) +0.4 +0.1 -0.1 -0.1 +0.5
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.4 +0.1 +0.1 -0.3 +0.6
carbon source Amylopectin from Potato (C) +0.7 -0.1 -0.1 -0.1 +0.7
carbon source D-Glucose 2.5 mg/ml (C) +0.0 +0.3 +0.4 +0.1 +0.3
carbon source amylopectin from maize (C) +0.6 +0.1 -0.2 -0.0 +0.8
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