Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS05265 and ABI39_RS05270 are separated by 34 nucleotidesABI39_RS05270 and ABI39_RS05275 are separated by 189 nucleotidesABI39_RS05275 and ABI39_RS05280 are separated by 54 nucleotidesABI39_RS05280 and ABI39_RS05285 are separated by 2 nucleotides ABI39_RS05265: ABI39_RS05265 - fumarate reductase/succinate dehydrogenase flavoprotein subunit, at 1,465,688 to 1,467,646 _RS05265 ABI39_RS05270: ABI39_RS05270 - succinate dehydrogenase/fumarate reductase cytochrome b subunit, at 1,467,681 to 1,468,367 _RS05270 ABI39_RS05275: ABI39_RS05275 - phosphatase PAP2 family protein, at 1,468,557 to 1,469,168 _RS05275 ABI39_RS05280: ABI39_RS05280 - S41 family peptidase, at 1,469,223 to 1,470,824 _RS05280 ABI39_RS05285: ABI39_RS05285 - pantetheine-phosphate adenylyltransferase, at 1,470,827 to 1,471,282 _RS05285
Group Condition ABI39_RS05265 ABI39_RS05270 ABI39_RS05275 ABI39_RS05280 ABI39_RS05285
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.1 -3.7 N.D.
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.5 -3.3 N.D.
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.3 -3.1 N.D.
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.4 -3.0 N.D.
carbon source Amylopectin from Potato (C) N.D. N.D. -0.4 -2.9 N.D.
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.0 -3.2 N.D.
carbon source beta-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. -0.2 -2.8 N.D.
carbon source Amylopectin from Potato (C) N.D. N.D. -0.2 -2.8 N.D.
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.2 -2.8 N.D.
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. +0.1 -3.0 N.D.
carbon source amylopectin from maize (C) N.D. N.D. -0.3 -2.5 N.D.
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.0 -2.8 N.D.
carbon source amylopectin from maize (C) N.D. N.D. -0.5 -2.3 N.D.
carbon source polygalacturonic (ultrapure) (C) N.D. N.D. -0.2 -2.5 N.D.
carbon source Glycogen; filtered 2.5 mg/ml (C) N.D. N.D. -0.7 -1.9 N.D.
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.2 -2.3 N.D.
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. +0.1 -2.6 N.D.
carbon source Glycogen; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.4 -2.1 N.D.
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) N.D. N.D. -0.1 -2.4 N.D.
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. -0.0 -2.4 N.D.
carbon source polygalacturonic (ultrapure) (C) N.D. N.D. -0.2 -2.2 N.D.
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.0 -2.4 N.D.
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.1 -2.4 N.D.
carbon source polygalacturonic (ultrapure); filtered 2.5 mg/ml (C) N.D. N.D. +0.1 -2.3 N.D.
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 -2.4 N.D.
carbon source D-Raffinose 2.5 mg/ml (C) N.D. N.D. +0.1 -2.2 N.D.
carbon source NAG 2.5 mg/ml (C) N.D. N.D. +0.1 -2.2 N.D.
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. N.D. +0.3 -2.3 N.D.
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. N.D. +0.3 -2.2 N.D.
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. N.D. +0.4 -2.1 N.D.
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