Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS04845 and ABI39_RS04850 are separated by 12 nucleotidesABI39_RS04850 and ABI39_RS04855 are separated by 144 nucleotidesABI39_RS04855 and ABI39_RS04860 are separated by 622 nucleotidesABI39_RS04860 and ABI39_RS04865 overlap by 11 nucleotides ABI39_RS04845: ABI39_RS04845 - outer membrane beta-barrel protein, at 1,351,994 to 1,352,641 _RS04845 ABI39_RS04850: ABI39_RS04850 - hypothetical protein, at 1,352,654 to 1,353,151 _RS04850 ABI39_RS04855: ABI39_RS04855 - glycoside hydrolase family 88 protein, at 1,353,296 to 1,354,594 _RS04855 ABI39_RS04860: ABI39_RS04860 - HigA family addiction module antidote protein, at 1,355,217 to 1,356,332 _RS04860 ABI39_RS04865: ABI39_RS04865 - type II toxin-antitoxin system RelE/ParE family toxin, at 1,356,322 to 1,356,645 _RS04865
Group Condition ABI39_RS04845 ABI39_RS04850 ABI39_RS04855 ABI39_RS04860 ABI39_RS04865
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 -0.1 +0.0 -6.9 -0.9
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 -0.2 +0.0 -6.8 -0.5
carbon source D-Glucose (C) +0.3 +0.1 +0.0 -7.7 +0.2
carbon source Amylopectin from Potato (C) +0.2 +0.1 +0.2 -5.5 -1.9
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.0 -0.0 -0.0 -5.5 -1.0
carbon source Amylopectin from Potato (C) +0.1 +0.1 +0.0 -5.4 -1.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.5 -0.3 -0.2 -6.0 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 -0.4 -0.1 -4.7 -0.7
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.4 -0.1 -0.4 -4.1 -0.6
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -0.1 -0.1 -0.0 -4.9 -0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.1 -0.3 -0.4 -3.4 -1.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.2 +0.3 -0.2 -3.4 -2.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.3 +0.1 -0.1 -3.1 -2.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.1 +0.1 +0.1 -4.5 -0.9
carbon source D-Mannose (C) +0.2 +0.0 -0.1 -5.3 -0.2
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.2 -0.1 +0.1 -4.1 -1.0
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 +0.0 +0.1 -4.0 -0.6
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.0 +0.1 -0.1 -3.6 -1.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 -0.4 -0.2 -4.0 -0.3
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.2 -0.0 -4.2 +0.1
carbon source N-acetylneuraminic (C) -0.2 +0.1 -0.0 -4.8 +0.5
carbon source N-acetylneuraminic (C) -0.1 +0.1 -0.0 -4.9 +0.5
carbon source polygalacturonic (ultrapure) (C) -0.2 -0.1 -0.0 -4.3 +0.2
carbon source beta-Cyclodextrin (C) +0.0 +0.2 -0.0 -4.1 -0.4
carbon source D-Fructose (C) -0.0 +0.0 -0.2 -4.4 +0.3
carbon source D-Raffinose (C) +0.0 +0.2 -0.1 -4.4 +0.1
carbon source D-Glucose (C) +0.2 +0.1 -0.1 -4.4 +0.0
carbon source Inulin from chicory; autoclaved 2.5 mg/ml (C) +0.2 -0.0 -0.0 -3.5 -0.8
carbon source D-Galactose (C) +0.3 -0.0 -0.1 -4.3 +0.2
carbon source D-Glucose 2.5 mg/ml (C) +0.0 +0.1 +0.2 -3.8 +0.4
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