Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS04175 and ABI39_RS21675 are separated by 94 nucleotidesABI39_RS21675 and ABI39_RS04195 are separated by 63 nucleotidesABI39_RS04195 and ABI39_RS04200 are separated by 143 nucleotidesABI39_RS04200 and ABI39_RS04205 are separated by 81 nucleotides ABI39_RS04175: ABI39_RS04175 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,181,178 to 1,182,044 _RS04175 ABI39_RS21675: ABI39_RS21675 - IS256 family transposase, at 1,182,139 to 1,183,368 _RS21675 ABI39_RS04195: ABI39_RS04195 - Na/Pi cotransporter family protein, at 1,183,432 to 1,185,123 _RS04195 ABI39_RS04200: ABI39_RS04200 - Na/Pi cotransporter family protein, at 1,185,267 to 1,186,958 _RS04200 ABI39_RS04205: ABI39_RS04205 - nucleoside kinase, at 1,187,040 to 1,188,713 _RS04205
Group Condition ABI39_RS04175 ABI39_RS21675 ABI39_RS04195 ABI39_RS04200 ABI39_RS04205
carbon source Glycogen; autoclaved 2.5 mg/ml (C) -0.4 -0.2 +0.0 -1.0 -0.4
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.6 -0.0 -0.0 -1.0 -0.3
carbon source Glycogen; filtered 2.5 mg/ml (C) -0.5 +0.0 +0.0 -1.0 -0.3
carbon source amylopectin from maize (C) -1.1 -0.0 -0.2 +0.2 -0.5
carbon source Amylopectin from Potato (C) -1.5 -0.2 +0.1 +0.5 -0.5
carbon source Starch from potato (C) -1.0 +0.0 -0.1 +0.3 -0.6
carbon source amylopectin from maize (C) -1.3 -0.0 +0.1 +0.4 -0.2
carbon source Amylopectin from Potato (C) -1.4 -0.2 +0.1 +0.8 -0.4
carbon source Starch from potato (C) -0.8 +0.2 +0.2 +0.0 -0.6
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -1.3 -0.3 -0.0 +1.0 -0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -1.3 -0.0 +0.1 +0.7 -0.3
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -1.2 +0.2 +0.1 +0.4 -0.4
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -1.3 -0.1 +0.1 +0.9 -0.3
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.9 -0.2 -0.1 +0.7 -0.3
carbon source Beta-Lactose 2.5 mg/ml (C) +0.6 -0.1 -0.3 -0.8 +0.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.3 +0.3 -0.2 -0.6 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -1.4 -0.3 +0.2 +1.2 -0.1
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.7 -0.1 +0.2 +0.6 +0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -1.4 -0.1 +0.3 +1.4 -0.2
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -1.3 +0.0 -0.0 +1.7 -0.2
carbon source D-Mannose (C) -0.2 +0.1 +0.1 +1.1 -0.4
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.6 -0.1 -0.1 +1.6 +0.0
carbon source D-Glucose (C) -0.1 +0.2 -0.1 +1.3 -0.3
carbon source D-Glucose (C) -0.1 +0.2 -0.0 +1.3 -0.3
carbon source D-Mannose (C) -0.1 +0.1 +0.1 +1.7 -0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 -0.2 -0.2 +2.1 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.5 +0.1 -0.2 +1.2 +0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 -0.2 +0.1 +2.1 -0.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 +0.2 -0.1 +2.2 +0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +0.1 +0.1 +2.3 -0.1
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