Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS03510 and ABI39_RS03515 are separated by 162 nucleotidesABI39_RS03515 and ABI39_RS03520 overlap by 1 nucleotidesABI39_RS03520 and ABI39_RS03525 are separated by 208 nucleotidesABI39_RS03525 and ABI39_RS03530 are separated by 115 nucleotides ABI39_RS03510: ABI39_RS03510 - ATP-binding protein, at 1,024,949 to 1,025,233 _RS03510 ABI39_RS03515: ABI39_RS03515 - iron-containing alcohol dehydrogenase, at 1,025,396 to 1,026,568 _RS03515 ABI39_RS03520: ABI39_RS03520 - creatininase family protein, at 1,026,568 to 1,027,323 _RS03520 ABI39_RS03525: ABI39_RS03525 - hypothetical protein, at 1,027,532 to 1,027,798 _RS03525 ABI39_RS03530: ABI39_RS03530 - DUF4221 domain-containing protein, at 1,027,914 to 1,029,068 _RS03530
Group Condition ABI39_RS03510 ABI39_RS03515 ABI39_RS03520 ABI39_RS03525 ABI39_RS03530
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -2.5 -0.4 -0.0 +0.1 +0.1
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -1.4 -0.2 -0.1 -0.3 -0.2
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -1.7 -0.5 +0.3 -0.0 -0.2
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) -1.0 -0.4 -0.1 -0.0 +0.0
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 -0.7 -0.4 -0.6 +0.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.8 -0.6 +0.1 -0.3 +0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -1.3 +0.4 -0.0 -0.4 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.1 -0.8 +0.4 -0.8 -0.1
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.7 -0.5 +0.1 +0.1 +0.1
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) -1.1 -0.2 -0.0 +0.3 +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.7 -0.0 -0.3 +0.4 +0.1
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.7 -0.3 +0.3 +0.3 -0.0
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.9 +0.1 -0.1 +0.6 -0.1
carbon source D-Glucosamine Hydrochloride 2.5 mg/ml (C) +0.2 -0.6 -0.2 +0.3 +0.0
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) -0.7 +0.1 +0.5 -0.2 -0.0
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.6 -0.6 +0.2 -0.3 -0.1
carbon source amylopectin from maize (C) -0.7 +0.1 -0.0 +0.7 +0.1
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.4 -0.4 -0.2 +0.3 +0.2
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.4 -0.4 -0.3 +0.4 +0.3
carbon source Beta-Lactose 2.5 mg/ml (C) +0.2 +0.3 -0.4 +0.4 +0.0
carbon source Fructose-6-phosphate (C) +0.8 -0.2 +0.3 -0.3 +0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.6 -0.4 +0.3 +0.3 -0.1
carbon source B-glucan from yeast (C) +0.9 -0.3 +0.1 +0.1 +0.2
carbon source NAG (C) +0.8 -0.2 +0.2 +0.2 +0.1
carbon source amylopectin from maize (C) +0.9 -0.2 +0.4 -0.1 +0.1
carbon source beta-Cyclodextrin (C) +0.8 -0.2 +0.2 +0.2 +0.2
carbon source D-Fructose (C) +0.9 -0.1 +0.3 +0.1 -0.0
carbon source D-Fructose (C) +0.8 -0.1 +0.3 +0.1 +0.2
carbon source Galactan from Potato (C) +1.5 -0.5 +0.4 +0.0 +0.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.5 +0.7 -0.0 +0.3 +0.0
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