Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS03445 and ABI39_RS03450 are separated by 89 nucleotidesABI39_RS03450 and ABI39_RS03455 are separated by 45 nucleotidesABI39_RS03455 and ABI39_RS03460 are separated by 39 nucleotidesABI39_RS03460 and ABI39_RS03465 are separated by 207 nucleotides ABI39_RS03445: ABI39_RS03445 - galactose mutarotase, at 994,810 to 995,832 _RS03445 ABI39_RS03450: ABI39_RS03450 - RagB/SusD family nutrient uptake outer membrane protein, at 995,922 to 997,541 _RS03450 ABI39_RS03455: ABI39_RS03455 - TonB-dependent receptor, at 997,587 to 1,000,640 _RS03455 ABI39_RS03460: ABI39_RS03460 - hypothetical protein, at 1,000,680 to 1,002,707 _RS03460 ABI39_RS03465: ABI39_RS03465 - response regulator, at 1,002,915 to 1,006,946 _RS03465
Group Condition ABI39_RS03445 ABI39_RS03450 ABI39_RS03455 ABI39_RS03460 ABI39_RS03465
carbon source D-Raffinose 2.5 mg/ml (C) +0.1 +0.0 -0.0 +0.0 -1.0
carbon source D-Raffinose 2.5 mg/ml (C) +0.2 +0.0 -0.1 +0.0 -1.0
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.3 +0.0 -0.3 -0.1 +0.1
carbon source amylopectin from maize (C) -0.2 +0.1 -0.2 -0.1 +0.1
carbon source Amylopectin from Potato (C) -0.3 +0.1 -0.1 -0.1 +0.1
carbon source B-glucan from yeast (C) -0.3 -0.1 -0.1 -0.1 +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.2 +0.1 -0.1 -0.2 +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.3 +0.2 -0.2 -0.1 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.0 +0.2 -0.3 -0.1 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.3 -0.1 -0.3 +0.1 +0.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.2 +0.1 -0.2 -0.1 +0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.3 -0.0 -0.2 +0.0 +0.1
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.3 -0.2 +0.0 +0.1 -0.0
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.3 +0.1 -0.2 +0.0 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.1 +0.3 -0.2 +0.0 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) +0.3 +0.0 -0.2 +0.2 -0.0
carbon source amylopectin from maize (C) +0.4 +0.2 -0.2 -0.2 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.5 +0.0 -0.1 +0.1 -0.1
carbon source Galactan from Potato (C) +0.2 +0.2 -0.2 +0.2 +0.0
carbon source NAG 2.5 mg/ml (C) +0.1 +0.2 +0.2 +0.1 -0.1
carbon source D-Xylose 2.5 mg/ml (C) +0.1 +0.3 +0.1 +0.2 +0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 +0.2 -0.1 +0.1 +0.2
carbon source D-Mannose 2.5 mg/ml (C) +0.1 +0.2 +0.2 +0.3 -0.0
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.4 +0.3 +0.1 +0.0 +0.1
carbon source D-Fructose 2.5 mg/ml (C) +0.1 +0.3 +0.3 +0.4 -0.0
carbon source D-Mannose 2.5 mg/ml (C) +0.1 +0.2 +0.2 +0.4 -0.0
carbon source D-Galactose 2.5 mg/ml (C) +0.1 +0.3 +0.3 +0.4 +0.0
carbon source D-Glucose 2.5 mg/ml (C) +0.4 +0.3 +0.4 +0.4 +0.1
carbon source D-Fructose 2.5 mg/ml (C) +0.3 +0.4 +0.4 +0.6 -0.0
carbon source D-Glucose 2.5 mg/ml (C) +0.4 +0.5 +0.4 +0.6 -0.0
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