Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS03420 and ABI39_RS03425 are separated by 95 nucleotidesABI39_RS03425 and ABI39_RS03430 are separated by 187 nucleotidesABI39_RS03430 and ABI39_RS03435 are separated by 12 nucleotidesABI39_RS03435 and ABI39_RS03440 are separated by 92 nucleotides ABI39_RS03420: ABI39_RS03420 - glycosyl hydrolase 43 family protein, at 984,885 to 986,426 _RS03420 ABI39_RS03425: ABI39_RS03425 - alpha-galactosidase, at 986,522 to 988,678 _RS03425 ABI39_RS03430: ABI39_RS03430 - AraC family transcriptional regulator, at 988,866 to 989,762 _RS03430 ABI39_RS03435: ABI39_RS03435 - 9-O-acetylesterase, at 989,775 to 991,745 _RS03435 ABI39_RS03440: ABI39_RS03440 - discoidin domain-containing protein, at 991,838 to 994,780 _RS03440
Group Condition ABI39_RS03420 ABI39_RS03425 ABI39_RS03430 ABI39_RS03435 ABI39_RS03440
carbon source D-Raffinose 2.5 mg/ml (C) -0.1 -1.4 -0.2 +0.1 -0.1
carbon source D-Raffinose 2.5 mg/ml (C) -0.2 -1.2 -0.2 -0.0 +0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.1 -0.3 -0.6 -0.3 +0.2
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.1 -0.8 +0.1 +0.0 +0.0
carbon source amylopectin from maize (C) -0.4 -0.0 -0.5 +0.1 -0.0
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) -0.2 -0.5 -0.2 +0.1 +0.1
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.2 -0.1 -0.5 +0.2 -0.0
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.3 -0.1 -0.0 +0.2 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.2 -0.0 -0.0 -0.5 -0.0
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.2 -0.1 -0.2 +0.2 +0.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 +0.0 -0.2 -0.1 +0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.3 +0.0 -0.3 +0.4 -0.1
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) -0.3 +0.0 -0.2 +0.2 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.1 -0.1 -0.2 +0.3 -0.1
carbon source amylopectin from maize (C) -0.2 +0.1 -0.3 +0.2 -0.0
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.0 +0.3 -0.3 -0.1 -0.1
carbon source Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml (C) -0.3 +0.0 -0.1 +0.2 -0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.3 -0.0 -0.0 +0.5 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.2 +0.2 -0.1 -0.1 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.2 +0.2 -0.5 +0.1 +0.1
carbon source Amylopectin from Potato (C) +0.2 -0.0 -0.3 +0.3 -0.2
carbon source Galactan from Potato (C) +0.1 +0.1 -0.5 +0.5 -0.1
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 +0.0 +0.2 +0.2 +0.3
carbon source NAG 2.5 mg/ml (C) +0.1 +0.1 +0.4 -0.2 +0.1
carbon source D-Glucose (C) -0.1 +0.1 -0.1 +0.4 +0.2
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.1 +0.1 -0.0 +0.4 -0.1
carbon source D-Fructose 2.5 mg/ml (C) +0.1 +0.1 -0.0 +0.2 +0.2
carbon source D-Glucose 2.5 mg/ml (C) +0.1 +0.1 -0.0 +0.3 +0.2
carbon source Galactan from Potato (C) +0.1 +0.1 -0.0 +0.3 +0.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.1 +0.4 +0.1 +0.3
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