Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS03165 and ABI39_RS03170 are separated by 208 nucleotidesABI39_RS03170 and ABI39_RS03175 overlap by 4 nucleotidesABI39_RS03175 and ABI39_RS03180 are separated by 2 nucleotidesABI39_RS03180 and ABI39_RS03185 are separated by 73 nucleotides ABI39_RS03165: ABI39_RS03165 - DUF3408 domain-containing protein, at 918,891 to 919,376 _RS03165 ABI39_RS03170: ABI39_RS03170 - plasmid mobilization relaxosome protein MobC, at 919,585 to 919,974 _RS03170 ABI39_RS03175: ABI39_RS03175 - relaxase/mobilization nuclease domain-containing protein, at 919,971 to 920,897 _RS03175 ABI39_RS03180: ABI39_RS03180 - hypothetical protein, at 920,900 to 921,535 _RS03180 ABI39_RS03185: ABI39_RS03185 - macro domain-containing protein, at 921,609 to 922,304 _RS03185
Group Condition ABI39_RS03165 ABI39_RS03170 ABI39_RS03175 ABI39_RS03180 ABI39_RS03185
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) +0.4 -2.9 -0.1 -0.9 +0.0
carbon source (+)-Arabinogalactan (C) -0.6 -1.8 +0.1 -0.3 -0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.4 -1.9 -0.1 +0.2 -0.3
carbon source B-glucan from yeast (C) -0.0 -1.6 +0.0 -0.4 -0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.4 -1.5 -0.0 -0.3 +0.1
carbon source B-glucan from yeast (C) -0.4 -1.9 -0.2 +0.3 +0.3
carbon source N-acetylneuraminic (C) -0.3 -1.8 +0.1 +0.2 +0.0
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.1 -1.1 -0.1 -0.5 -0.1
carbon source beta-Cyclodextrin (C) -0.3 -1.4 +0.1 -0.3 +0.2
carbon source Mucin from porcine stomach type III (C) -0.5 -0.7 -0.2 -0.5 +0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.1 -1.6 -0.1 -0.3 +0.1
carbon source N-acetylneuraminic (C) -0.5 -1.5 +0.2 -0.2 +0.3
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.0 -1.6 -0.2 +0.3 -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.2 -1.3 +0.2 -0.5 +0.2
carbon source Beta-Lactose 2.5 mg/ml (C) -0.0 -0.9 +0.3 +0.2 -0.7
carbon source amylopectin from maize (C) -0.4 -0.8 +0.1 -0.3 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.5 +0.7 -0.8 -0.2 -0.1
carbon source Glucose-6-Phosphate (C) -0.3 -1.2 +0.2 +0.4 +0.3
carbon source Fructose-6-phosphate (C) +0.4 -1.3 +0.1 +0.2 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.4 -1.0 +0.3 +0.3 +0.3
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.2 +0.9 +0.1 -0.5 -0.7
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.9 +0.3 -0.4 +0.2 +0.4
carbon source Galactan from Potato (C) +0.0 -1.1 -0.3 -0.2 +1.2
carbon source Galactan from Potato (C) +0.3 -0.4 -0.4 -0.3 +0.9
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) -0.2 +1.1 -0.3 +0.1 -0.4
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.6 +1.4 -0.1 +0.2 -0.5
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.7 +1.2 +0.1 -0.1 +0.0
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.3 +0.3 -0.4 +0.5 +0.5
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +1.5 -0.3 +0.0 -0.4
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.4 +1.1 +0.1 -0.1 +0.7
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