Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS02975 and ABI39_RS02980 are separated by 107 nucleotidesABI39_RS02980 and ABI39_RS02985 are separated by 23 nucleotidesABI39_RS02985 and ABI39_RS02990 are separated by 307 nucleotidesABI39_RS02990 and ABI39_RS02995 are separated by 39 nucleotides ABI39_RS02975: ABI39_RS02975 - argininosuccinate synthase, at 867,284 to 868,492 _RS02975 ABI39_RS02980: ABI39_RS02980 - N-acetyltransferase, at 868,600 to 869,157 _RS02980 ABI39_RS02985: ABI39_RS02985 - arginine repressor, at 869,181 to 869,657 _RS02985 ABI39_RS02990: ABI39_RS02990 - rhamnulokinase, at 869,965 to 871,443 _RS02990 ABI39_RS02995: ABI39_RS02995 - L-rhamnose isomerase, at 871,483 to 872,739 _RS02995
Group Condition ABI39_RS02975 ABI39_RS02980 ABI39_RS02985 ABI39_RS02990 ABI39_RS02995
carbon source D-Arabinose (C) -10.1 -9.7 -1.2 +0.2 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -8.1 -7.2 -5.2 -0.1 +0.2
carbon source D-Arabinose (C) -10.2 -8.3 -1.0 +0.2 -0.0
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -9.2 -8.5 -1.0 -0.2 -0.1
carbon source Pectic galactan from potato (C) -8.7 -8.2 -0.7 -0.4 -0.6
carbon source D-Xylose (C) -7.4 -9.1 -1.6 -0.1 -0.2
carbon source D-Glucose (C) -6.5 -8.0 -3.4 +0.1 -0.2
carbon source Starch from potato (C) -9.3 -8.2 -0.6 +0.2 +0.0
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -8.7 -8.0 -0.4 -0.2 -0.5
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -7.2 -7.5 -2.6 -0.1 -0.4
carbon source Starch from potato (C) -9.5 -7.6 -0.8 +0.1 +0.1
carbon source Dextrin from potato starch (C) -7.9 -8.0 -1.6 +0.1 -0.4
carbon source D-Glucose 5 mg/ml (C) -8.6 -7.0 -1.5 -0.1 -0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -7.6 -7.8 -2.1 -0.0 -0.0
carbon source Dextrin from potato starch (C) -8.3 -7.5 -1.6 +0.1 +0.0
carbon source D-Glucosamine Hydrochloride (C) -8.1 -8.1 -0.8 -0.0 -0.1
carbon source D-Glucosamine Hydrochloride (C) -9.2 -6.9 -0.9 +0.1 +0.0
carbon source Pectic galactan from potato (C) -7.8 -7.3 -0.8 -0.4 -0.7
carbon source D-Mannose (C) -5.7 -7.0 -4.2 +0.1 -0.1
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -6.0 -6.4 -4.2 -0.1 -0.0
carbon source D-Maltose (C) -6.6 -7.9 -2.0 +0.0 -0.2
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -7.9 -7.2 -0.4 -0.5 -0.4
carbon source D-Glucose (C) -7.2 -5.6 -3.6 +0.0 -0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) -7.2 -8.6 -0.5 +0.0 -0.2
carbon source Xylan from Beechwood (C) -8.1 -7.3 -0.8 +0.2 -0.3
carbon source D-Fructose (C) -7.3 -6.3 -2.6 +0.0 -0.1
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -6.9 -7.2 -0.8 -0.6 -0.7
carbon source Galactose 1-phosphate dipotassium salt (C) -7.7 -7.7 -0.5 +0.2 -0.2
carbon source Galactan from Potato (C) -6.9 -8.3 -1.3 +0.7 -0.1
carbon source Galactan from Potato (C) -7.0 -8.2 -1.3 +0.9 +0.2
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