Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS02850 and ABI39_RS02855 are separated by 103 nucleotidesABI39_RS02855 and ABI39_RS02860 are separated by 58 nucleotidesABI39_RS02860 and ABI39_RS02865 are separated by 29 nucleotidesABI39_RS02865 and ABI39_RS02870 are separated by 385 nucleotides ABI39_RS02850: ABI39_RS02850 - D-alanine--D-alanine ligase, at 826,936 to 827,910 _RS02850 ABI39_RS02855: ABI39_RS02855 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 828,014 to 829,171 _RS02855 ABI39_RS02860: ABI39_RS02860 - NigD-like N-terminal domain-containing protein, at 829,230 to 829,880 _RS02860 ABI39_RS02865: ABI39_RS02865 - rhodanese-like domain-containing protein, at 829,910 to 830,308 _RS02865 ABI39_RS02870: ABI39_RS02870 - acetylornithine carbamoyltransferase, at 830,694 to 831,659 _RS02870
Group Condition ABI39_RS02850 ABI39_RS02855 ABI39_RS02860 ABI39_RS02865 ABI39_RS02870
carbon source D-Glucosamine Hydrochloride (C) N.D. N.D. -0.2 -0.1 -9.9
carbon source Xylan from Beechwood (C) N.D. N.D. +0.2 -0.2 -9.8
carbon source D-Arabinose (C) N.D. N.D. -0.1 +0.2 -9.7
carbon source Starch from potato (C) N.D. N.D. +0.3 -0.2 -9.7
carbon source Starch from potato (C) N.D. N.D. +0.2 +0.0 -9.6
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.1 -1.1 -8.1
carbon source Amylopectin from Potato (C) N.D. N.D. +0.4 +0.1 -9.6
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) N.D. N.D. -0.1 -0.1 -8.6
carbon source a-Cyclodextrin (C) N.D. N.D. +0.3 +0.1 -9.0
carbon source D-Glucosamine Hydrochloride (C) N.D. N.D. -0.2 +0.5 -8.9
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.2 -0.4 -8.0
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.2 -0.3 -8.4
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) N.D. N.D. +0.1 -0.6 -7.8
carbon source Galactan from Potato (C) N.D. N.D. +0.3 -0.2 -8.3
carbon source D-Glucose 5 mg/ml (C) N.D. N.D. -0.0 +0.1 -8.2
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) N.D. N.D. -0.0 -0.2 -7.5
carbon source D-Arabinose (C) N.D. N.D. -0.2 +0.4 -8.0
carbon source Galactan from Potato (C) N.D. N.D. +0.7 -0.2 -8.2
carbon source D-Raffinose 2.5 mg/ml (C) N.D. N.D. -0.0 -0.1 -7.5
carbon source a-Cyclodextrin (C) N.D. N.D. +0.3 +0.3 -8.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. -0.1 -0.4 -7.1
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.2 -0.3 -7.3
carbon source Amylopectin from Potato (C) N.D. N.D. +0.5 +0.6 -8.5
carbon source beta-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. +0.3 -0.1 -7.6
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. N.D. +0.3 -0.2 -7.5
carbon source Beta-Lactose (C) N.D. N.D. -0.1 +0.2 -7.4
carbon source D-Mannose (C) N.D. N.D. -0.1 +0.3 -7.3
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. N.D. +0.3 -0.8 -6.6
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) N.D. N.D. +0.3 +0.1 -7.5
carbon source Pectic galactan from potato (C) N.D. N.D. +0.5 +0.2 -7.7
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