Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS01610 and ABI39_RS01615 are separated by 55 nucleotidesABI39_RS01615 and ABI39_RS01620 are separated by 31 nucleotidesABI39_RS01620 and ABI39_RS01625 are separated by 20 nucleotidesABI39_RS01625 and ABI39_RS01630 are separated by 145 nucleotides ABI39_RS01610: ABI39_RS01610 - DUF4981 domain-containing protein, at 478,455 to 481,684 _RS01610 ABI39_RS01615: ABI39_RS01615 - glycoside hydrolase, at 481,740 to 483,809 _RS01615 ABI39_RS01620: ABI39_RS01620 - RagB/SusD family nutrient uptake outer membrane protein, at 483,841 to 485,376 _RS01620 ABI39_RS01625: ABI39_RS01625 - TonB-dependent receptor, at 485,397 to 488,813 _RS01625 ABI39_RS01630: ABI39_RS01630 - FecR family protein, at 488,959 to 489,945 _RS01630
Group Condition ABI39_RS01610 ABI39_RS01615 ABI39_RS01620 ABI39_RS01625 ABI39_RS01630
carbon source B-glucan from yeast (C) -0.0 -0.2 +0.0 -0.2 -0.6
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.0 +0.0 -0.2 -0.1 -0.7
carbon source D-Galactose 2.5 mg/ml (C) -0.1 -0.2 -0.2 -0.1 -0.4
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.0 -0.2 -0.1 +0.0 -0.7
carbon source D-Glucose 2.5 mg/ml (C) -0.1 -0.3 -0.2 -0.1 -0.2
carbon source amylopectin from maize (C) -0.0 +0.1 -0.3 +0.0 -0.6
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.0 +0.0 -0.1 +0.0 -0.8
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.1 -0.1 -0.4 +0.0 -0.2
carbon source D-Fructose 2.5 mg/ml (C) +0.0 -0.3 -0.2 +0.0 -0.3
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.2 -0.0 -0.1 -0.1 -0.7
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.1 +0.0 -0.1 +0.1 -0.6
carbon source Fructose-6-phosphate (C) -0.1 +0.1 +0.1 -0.0 -0.5
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.3 +0.2 -0.0 -0.1 -0.3
carbon source Pectin from apple; filtered 1 mg/ml (C) +0.2 +0.1 -0.1 +0.1 -0.5
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.0 -0.3 -0.1 -0.2 +0.4
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) +0.1 +0.1 +0.1 +0.1 -0.6
carbon source Glucose-6-Phosphate (C) -0.1 +0.2 -0.1 +0.1 -0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.2 +0.1 +0.1 +0.0 -0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.0 +0.3 +0.0 +0.1 -0.4
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) +0.1 +0.1 +0.1 -0.1 -0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.1 +0.1 -0.1 +0.3 -0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.0 +0.3 -0.3 +0.1 -0.0
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.4 -0.1 +0.1 -0.4
carbon source Amylopectin from Potato (C) -0.2 +0.1 +0.4 +0.0 -0.2
carbon source Galactan from Potato (C) -0.1 +0.4 +0.1 +0.1 -0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.4 -0.1 +0.1 -0.2
carbon source Amylopectin from Potato (C) -0.2 +0.2 +0.1 -0.0 +0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.2 +0.3 +0.1 +0.3
carbon source Mucin from porcine stomach type III (C) +0.0 +0.2 +0.3 +0.5 +0.1
carbon source Mucin from porcine stomach type III (C) +0.0 +0.2 +0.4 +0.5 +0.2
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ABI39_RS01610
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