Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS01280 and ABI39_RS01285 are separated by 11 nucleotidesABI39_RS01285 and ABI39_RS01290 are separated by 49 nucleotidesABI39_RS01290 and ABI39_RS01295 are separated by 449 nucleotidesABI39_RS01295 and ABI39_RS01300 are separated by 461 nucleotides ABI39_RS01280: ABI39_RS01280 - efflux transporter outer membrane subunit, at 393,482 to 394,867 _RS01280 ABI39_RS01285: ABI39_RS01285 - efflux RND transporter permease subunit, at 394,879 to 398,097 _RS01285 ABI39_RS01290: ABI39_RS01290 - efflux RND transporter periplasmic adaptor subunit, at 398,147 to 399,358 _RS01290 ABI39_RS01295: ABI39_RS01295 - NADP-dependent malic enzyme, at 399,808 to 402,093 _RS01295 ABI39_RS01300: ABI39_RS01300 - NADP-specific glutamate dehydrogenase, at 402,555 to 403,889 _RS01300
Group Condition ABI39_RS01280 ABI39_RS01285 ABI39_RS01290 ABI39_RS01295 ABI39_RS01300
carbon source D-Mannose (C) +0.3 +0.2 -0.0 -2.1 -6.5
carbon source beta-Cyclodextrin (C) -0.4 -0.1 -0.2 -1.2 -6.2
carbon source Inulin from chicory; autoclaved 2.5 mg/ml (C) +0.1 -0.1 -0.2 -0.9 -7.1
carbon source D-Glucose (C) +0.6 +0.1 +0.0 -1.9 -6.6
carbon source D-Mannose (C) +0.2 +0.2 +0.3 -1.8 -6.4
carbon source D-Maltose (C) -0.2 -0.0 -0.2 -0.9 -6.3
carbon source D-Glucose (C) +0.4 +0.3 +0.1 -1.5 -6.9
carbon source D-Glucose 5 mg/ml (C) +0.2 -0.1 -0.2 -0.8 -6.5
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.1 -0.2 -0.4 -0.9 -5.9
carbon source Dextrin from potato starch (C) -0.2 +0.0 -0.0 -0.9 -5.6
carbon source D-Xylose (C) -0.1 +0.0 +0.0 -0.8 -5.8
carbon source beta-Cyclodextrin (C) +0.1 -0.2 -0.2 -1.1 -5.1
carbon source D-Maltose (C) +0.1 -0.0 -0.1 -0.9 -5.6
carbon source Dextrin from potato starch (C) -0.2 +0.1 -0.2 -0.9 -4.9
carbon source D-Galactose (C) +0.2 +0.4 +0.1 -1.0 -5.8
carbon source a-Cyclodextrin (C) -0.1 -0.1 -0.1 -0.8 -4.7
carbon source Beta-Lactose (C) -0.1 +0.1 -0.1 -0.8 -5.1
carbon source NAG (C) -0.0 +0.2 +0.0 -0.8 -5.2
carbon source D-Xylose (C) +0.1 -0.0 +0.1 -0.8 -5.0
carbon source D-Galactose (C) +0.4 +0.4 +0.2 -1.0 -5.7
carbon source Beta-Lactose (C) -0.0 +0.1 -0.1 -0.7 -4.7
carbon source B-glucan from yeast (C) -0.5 -0.6 -0.8 -0.2 -3.3
carbon source NAG (C) +0.1 +0.1 -0.2 -0.9 -4.5
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) +0.1 +0.0 +0.0 -0.8 -4.6
carbon source D-Fructose (C) +0.4 +0.2 +0.1 -1.1 -4.9
carbon source D-Fructose (C) +0.3 +0.3 +0.1 -0.8 -5.2
carbon source D-Raffinose (C) +0.5 +0.2 -0.0 -0.8 -4.8
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) +0.5 -0.0 +0.2 -0.6 -4.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.8 +0.8 +0.9 -0.5 -3.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.6 +1.1 +0.8 -0.3 -3.3
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ABI39_RS01280
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ABI39_RS01285
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ABI39_RS01295
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ABI39_RS01300
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