Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS01255 and ABI39_RS01260 are separated by 88 nucleotidesABI39_RS01260 and ABI39_RS01265 are separated by 23 nucleotidesABI39_RS01265 and ABI39_RS01270 are separated by 36 nucleotidesABI39_RS01270 and ABI39_RS01275 are separated by 29 nucleotides ABI39_RS01255: ABI39_RS01255 - efflux RND transporter permease subunit, at 386,341 to 389,511 _RS01255 ABI39_RS01260: ABI39_RS01260 - efflux RND transporter periplasmic adaptor subunit, at 389,600 to 390,622 _RS01260 ABI39_RS01265: ABI39_RS01265 - TolC family protein, at 390,646 to 391,971 _RS01265 ABI39_RS01270: ABI39_RS01270 - TetR/AcrR family transcriptional regulator, at 392,008 to 392,661 _RS01270 ABI39_RS01275: ABI39_RS01275 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 392,691 to 393,458 _RS01275
Group Condition ABI39_RS01255 ABI39_RS01260 ABI39_RS01265 ABI39_RS01270 ABI39_RS01275
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 -0.2 -0.5 -1.3 -0.3
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.4 -0.0 +0.0 -1.1 -0.7
carbon source D-Mannose 2.5 mg/ml (C) -0.6 -0.5 -0.6 +0.1 -0.2
carbon source D-Xylose 2.5 mg/ml (C) -0.4 -0.4 -0.8 -0.0 -0.0
carbon source D-Xylose 2.5 mg/ml (C) -0.4 -0.5 -0.6 +0.0 -0.0
carbon source (+)-Arabinogalactan (C) -0.1 -0.1 -0.3 -0.3 -0.6
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) -0.4 -0.5 -0.5 -0.0 +0.0
carbon source D-Mannose 2.5 mg/ml (C) -0.5 -0.5 -0.5 +0.3 -0.1
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) -0.3 -0.6 -0.4 -0.0 +0.1
carbon source Beta-Lactose 2.5 mg/ml (C) -0.7 -0.7 -0.6 +0.6 +0.2
carbon source D-Raffinose 2.5 mg/ml (C) -0.5 -0.5 -0.5 +0.4 -0.1
carbon source Galactan from Potato (C) -0.4 -0.2 +0.7 -0.7 -0.4
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.1 -0.5 -0.5 +0.4 -0.3
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.2 -0.1 +0.0 -1.0 -0.1
carbon source polygalacturonic (ultrapure) (C) +0.0 -0.0 +0.3 -0.6 -0.5
carbon source D-Raffinose 2.5 mg/ml (C) -0.4 -0.4 -0.3 +0.4 -0.1
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.2 +0.3 +0.5 -1.1 -0.6
carbon source NAG 2.5 mg/ml (C) -0.5 -0.3 -0.3 +0.1 +0.2
carbon source Beta-Lactose 2.5 mg/ml (C) -0.4 -0.3 -0.3 +0.6 -0.2
carbon source D-Fructose 2.5 mg/ml (C) -0.4 -0.3 -0.4 +0.1 +0.4
carbon source Galactan from Potato (C) -0.2 -0.1 +0.6 -0.7 -0.0
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.3 +0.2 +0.4 -0.6 -0.2
carbon source Amylopectin from Potato (C) +0.1 +0.5 +0.3 -0.6 -0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.3 +0.5 +0.3 -0.1 -0.4
carbon source Glycogen; filtered 2.5 mg/ml (C) +0.3 +0.5 +0.4 -0.0 -0.3
carbon source Glycogen; autoclaved 2.5 mg/ml (C) +0.3 +0.5 +0.4 -0.2 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.1 +0.2 -0.3 +0.7 +0.5
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.3 +0.4 +0.7 +0.0 +0.1
carbon source Glycogen; filtered 2.5 mg/ml (C) +0.5 +0.7 +0.7 -0.1 -0.2
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.4 +0.6 +0.9 +0.2 +0.2
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