Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS01095 and ABI39_RS01100 are separated by 2 nucleotidesABI39_RS01100 and ABI39_RS01105 overlap by 14 nucleotidesABI39_RS01105 and ABI39_RS01110 are separated by 165 nucleotidesABI39_RS01110 and ABI39_RS01115 are separated by 514 nucleotides ABI39_RS01095: ABI39_RS01095 - ABC transporter ATP-binding protein, at 348,729 to 349,388 _RS01095 ABI39_RS01100: ABI39_RS01100 - tRNA threonylcarbamoyladenosine dehydratase, at 349,391 to 350,113 _RS01100 ABI39_RS01105: ABI39_RS01105 - cation:proton antiporter, at 350,100 to 352,247 _RS01105 ABI39_RS01110: ABI39_RS01110 - aspartate-semialdehyde dehydrogenase, at 352,413 to 353,423 _RS01110 ABI39_RS01115: ABI39_RS01115 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 353,938 to 354,576 _RS01115
Group Condition ABI39_RS01095 ABI39_RS01100 ABI39_RS01105 ABI39_RS01110 ABI39_RS01115
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) N.D. -0.4 -0.2 N.D. -0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. -0.1 +0.2 N.D. -0.8
carbon source amylopectin from maize (C) N.D. -0.3 +0.3 N.D. -0.7
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.8 -0.5 N.D. -0.7
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.3 -0.2 N.D. -0.4
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.7 -0.3 N.D. -0.6
carbon source N-acetylneuraminic (C) N.D. +0.3 -0.0 N.D. -0.5
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.4 +0.0 N.D. -0.6
carbon source D-Mannose 2.5 mg/ml (C) N.D. +0.3 -0.0 N.D. -0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.1 N.D. -0.5
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.4 -0.3 N.D. -0.2
carbon source a-Cyclodextrin 2.5 mg/ml (C) N.D. +0.2 +0.1 N.D. -0.5
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.4 -0.2 N.D. -0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.1 N.D. -0.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen N.D. +0.6 -0.2 N.D. -0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) N.D. -0.5 +0.3 N.D. +0.2
carbon source (+)-Arabinogalactan (C) N.D. +0.4 +0.1 N.D. -0.4
carbon source Amylopectin from Potato (C) N.D. +0.5 +0.1 N.D. -0.4
carbon source Xylan from Beechwood (C) N.D. +0.3 +0.2 N.D. -0.3
carbon source Beta-Lactose 2.5 mg/ml (C) N.D. +0.6 +0.1 N.D. -0.6
carbon source Beta-Lactose 2.5 mg/ml (C) N.D. +0.4 +0.4 N.D. -0.5
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) N.D. -0.2 +0.2 N.D. +0.4
carbon source Locust bean gum; autoclaved 2.5 mg/ml (C) N.D. +0.3 +0.2 N.D. -0.2
carbon source NAG 2.5 mg/ml (C) N.D. +0.5 +0.0 N.D. -0.2
carbon source Pectin from apple; filtered 1 mg/ml (C) N.D. +0.4 +0.2 N.D. -0.2
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) N.D. +0.5 +0.1 N.D. +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. -0.1 +0.1 N.D. +0.9
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) N.D. +0.1 +0.4 N.D. +0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) N.D. +0.7 -0.0 N.D. +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) N.D. +0.2 +0.3 N.D. +0.5
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ABI39_RS01095
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ABI39_RS01100
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