Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS01000 and ABI39_RS01005 are separated by 18 nucleotidesABI39_RS01005 and ABI39_RS01010 are separated by 17 nucleotidesABI39_RS01010 and ABI39_RS01015 overlap by 23 nucleotidesABI39_RS01015 and ABI39_RS01020 overlap by 4 nucleotides ABI39_RS01000: ABI39_RS01000 - beta-glucuronidase, at 322,900 to 325,767 _RS01000 ABI39_RS01005: ABI39_RS01005 - rhamnogalacturonan acetylesterase, at 325,786 to 327,060 _RS01005 ABI39_RS01010: ABI39_RS01010 - right-handed parallel beta-helix repeat-containing protein, at 327,078 to 328,562 _RS01010 ABI39_RS01015: ABI39_RS01015 - DUF4450 domain-containing protein, at 328,540 to 329,238 _RS01015 ABI39_RS01020: ABI39_RS01020 - hypothetical protein, at 329,235 to 330,038 _RS01020
Group Condition ABI39_RS01000 ABI39_RS01005 ABI39_RS01010 ABI39_RS01015 ABI39_RS01020
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 +0.3 -0.1 -0.1 -0.4
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.0 +0.2 -0.5 -0.0 +0.3
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.1 +0.3 -0.0 -0.4 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.0 +0.7 -0.3 -0.1 -0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.0 +0.5 -0.5 -0.2 +0.3
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) +0.1 +0.5 -0.4 -0.2 +0.2
carbon source Galactan from Potato (C) -0.1 +0.3 +0.3 -0.1 -0.3
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.1 +0.4 -0.5 +0.1 +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) +0.0 +0.4 -0.3 -0.1 +0.2
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) +0.1 +0.2 -0.4 +0.0 +0.3
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.1 +0.1 -0.3 +0.4 -0.1
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.1 +0.3 -0.4 +0.3 +0.2
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -0.1 +0.6 -0.1 -0.3 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.1 +0.2 -0.3 +0.3 +0.2
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.0 +0.6 -0.2 +0.3 -0.1
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.0 +0.4 -0.1 -0.1 +0.4
carbon source D-Raffinose 2.5 mg/ml (C) +0.1 +0.4 -0.2 +0.2 +0.1
carbon source a-Cyclodextrin 2.5 mg/ml (C) +0.0 +0.5 -0.1 -0.2 +0.4
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 +0.2 -0.3 +0.4 +0.2
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.0 +0.8 -0.3 -0.0 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 +0.3 -0.0 +0.4 +0.2
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.0 +0.5 -0.2 +0.4 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.0 +0.3 -0.3 +0.2 +0.6
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.1 +0.6 -0.2 +0.4 +0.2
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.1 +0.5 -0.0 +0.2 +0.2
carbon source Galactan from Potato (C) -0.1 +0.4 +0.4 +0.2 +0.0
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) +0.2 +0.4 -0.0 +0.1 +0.3
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) +0.1 +0.6 -0.1 +0.1 +0.5
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.0 +0.8 -0.2 +0.4 +0.5
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.0 +1.0 -0.2 +1.0 +0.1
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ABI39_RS01000
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ABI39_RS01005
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ABI39_RS01015
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ABI39_RS01020
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