Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS00445 and ABI39_RS00450 are separated by 56 nucleotidesABI39_RS00450 and ABI39_RS00455 are separated by 108 nucleotidesABI39_RS00455 and ABI39_RS00460 are separated by 18 nucleotidesABI39_RS00460 and ABI39_RS00465 overlap by 14 nucleotides ABI39_RS00445: ABI39_RS00445 - endonuclease/exonuclease/phosphatase family protein, at 127,290 to 128,321 _RS00445 ABI39_RS00450: ABI39_RS00450 - family 20 glycosylhydrolase, at 128,378 to 130,684 _RS00450 ABI39_RS00455: ABI39_RS00455 - hypothetical protein, at 130,793 to 131,284 _RS00455 ABI39_RS00460: ABI39_RS00460 - hypothetical protein, at 131,303 to 131,524 _RS00460 ABI39_RS00465: ABI39_RS00465 - carbon starvation protein A, at 131,511 to 132,941 _RS00465
Group Condition ABI39_RS00445 ABI39_RS00450 ABI39_RS00455 ABI39_RS00460 ABI39_RS00465
carbon source D-Galactose (C) -0.1 -0.2 -0.6 -0.2 +0.0
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.2 -0.1 -0.5 -0.3 +0.0
carbon source Pectic galactan from potato; autoclaved 2.5 mg/ml (C) -0.1 +0.2 -0.3 -0.6 -0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.4 +0.1 -0.7 -0.5 -0.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 -0.2 -0.2 -0.4 -0.2
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.3 -0.0 +0.3 -0.5 -0.3
carbon source Galactose 1-phosphate dipotassium salt (C) +0.0 +0.1 -0.5 -0.3 -0.1
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.2 +0.2 -0.2 -0.6 -0.0
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.1 +0.1 +0.4 -1.0 -0.1
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.0 +0.2 -0.7 -0.3 +0.2
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.5 +0.2 +0.2 -0.3 +0.0
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 -0.4 -0.0 -0.2 +0.3
carbon source Fructose-6-phosphate (C) +0.1 +0.3 -0.6 -0.3 +0.0
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.4 +0.2 -0.8 +0.3 +0.2
carbon source Mucin from porcine stomach type III (C) +0.2 +0.2 -0.1 -0.3 -0.2
carbon source amylopectin from maize (C) +0.2 +0.4 -0.5 -0.1 -0.1
carbon source Galactan from Potato (C) +0.1 +0.6 -0.9 +0.3 -0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 -0.4 +0.5 -0.1 +0.2
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.4 -0.0 +0.1 +0.5
carbon source B-glucan from yeast; autoclaved 2.5 mg/ml (C) -0.3 +0.1 +0.5 -0.4 +0.2
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) -0.2 -0.1 +0.5 -0.2 +0.0
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.1 +0.0 +0.4 -0.4 +0.1
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.0 -0.1 -0.4 +0.6 +0.0
carbon source Galactan from Potato (C) +0.1 +0.5 -0.8 +0.8 -0.4
carbon source amylopectin from maize (C) +0.1 +0.2 -0.4 +0.6 -0.2
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.3 +0.2 +0.4 +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.2 +0.4 +0.4 -0.2 +0.0
carbon source a-Cyclodextrin 2.5 mg/ml (C) -0.4 +0.1 +0.8 -0.2 +0.1
carbon source D-Glucose 2.5 mg/ml (C) -0.2 -0.1 +0.4 +0.3 +0.2
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.0 +0.5 +0.3 -0.3 +0.1
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