Fitness for 5 genes in Phocaeicola dorei CL03T12C01

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500 ntABI39_RS00375 and ABI39_RS00380 are separated by 106 nucleotidesABI39_RS00380 and ABI39_RS00385 are separated by 76 nucleotidesABI39_RS00385 and ABI39_RS00390 are separated by 6 nucleotidesABI39_RS00390 and ABI39_RS00395 are separated by 14 nucleotides ABI39_RS00375: ABI39_RS00375 - dihydrofolate reductase, at 102,479 to 103,363 _RS00375 ABI39_RS00380: ABI39_RS00380 - TerB family tellurite resistance protein, at 103,470 to 104,252 _RS00380 ABI39_RS00385: ABI39_RS00385 - peptide chain release factor 3, at 104,329 to 105,897 _RS00385 ABI39_RS00390: ABI39_RS00390 - dTDP-4-dehydrorhamnose reductase, at 105,904 to 106,761 _RS00390 ABI39_RS00395: ABI39_RS00395 - DUF4924 family protein, at 106,776 to 107,318 _RS00395
Group Condition ABI39_RS00375 ABI39_RS00380 ABI39_RS00385 ABI39_RS00390 ABI39_RS00395
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.2 -0.4 N.D. -1.0 +0.1
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 -0.1 N.D. -1.1 +0.1
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.9 -0.4 N.D. -0.5 +0.3
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.3 +0.0 N.D. -1.3 +0.1
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.1 -0.3 N.D. -0.5 -0.7
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.1 -0.3 N.D. -0.7 -0.0
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.1 -0.1 N.D. -0.6 -0.2
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.1 -0.3 N.D. -0.5 -0.3
carbon source D-Arabinose (C) -0.1 -0.1 N.D. -0.9 +0.2
carbon source Galactan from Potato (C) +0.2 -0.1 N.D. -0.7 -0.3
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.2 +0.1 N.D. -0.3 -0.7
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.0 -0.1 N.D. +0.6 -0.8
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.3 -0.1 N.D. +0.1 -0.6
carbon source Xylan from Beechwood (C) +0.0 +0.0 N.D. -0.7 +0.3
carbon source Xylan from Beechwood (C) -0.1 -0.0 N.D. -0.5 +0.4
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) +0.0 -0.4 N.D. -0.4 +0.6
carbon source Galactan from Potato (C) +0.1 +0.8 N.D. -0.5 -0.6
carbon source N-acetylneuraminic (C) +0.1 +0.1 N.D. -0.5 +0.4
carbon source B-glucan from yeast (C) -0.1 +0.1 N.D. -0.3 +0.4
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +1.0 -0.0 N.D. -0.3 -0.5
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.0 +0.3 N.D. +0.4 -0.4
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.0 -0.0 N.D. -0.3 +0.7
carbon source Xylan from corn core; autoclaved 2.5 mg/ml (C) -0.2 -0.2 N.D. +0.3 +0.4
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.1 -0.3 N.D. -0.0 +0.9
carbon source B-glucan from yeast (C) +0.0 +0.3 N.D. -0.2 +0.5
carbon source D-Xylose 2.5 mg/ml (C) -0.1 -0.0 N.D. +0.4 +0.4
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) +0.5 -0.0 N.D. +0.1 +0.3
carbon source D-Fructose 2.5 mg/ml (C) +0.1 -0.0 N.D. +0.6 +0.2
carbon source D-Mannose 2.5 mg/ml (C) +0.2 -0.2 N.D. +0.5 +0.3
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) +0.1 +0.3 N.D. +0.3 +0.4
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