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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS15575 and A4249_RS15580 overlap by 4 nucleotides
A4249_RS15580 and A4249_RS15585 are separated by 15 nucleotides
A4249_RS15585 and A4249_RS15590 overlap by 4 nucleotides
A4249_RS15590 and A4249_RS15595 are separated by 2 nucleotides
A4249_RS15575: A4249_RS15575 - protein-glutamate O-methyltransferase, at 3,153,628 to 3,154,488
_RS15575
A4249_RS15580: A4249_RS15580 - chemotaxis response regulator protein-glutamate methylesterase, at 3,154,485 to 3,155,522
_RS15580
A4249_RS15585: A4249_RS15585 - response regulator, at 3,155,538 to 3,155,927
_RS15585
A4249_RS15590: A4249_RS15590 - chemotaxis protein CheD, at 3,155,924 to 3,156,466
_RS15590
A4249_RS15595: A4249_RS15595 - hypothetical protein, at 3,156,469 to 3,156,813
_RS15595
Group
Condition
A4249
_RS15575
A4249
_RS15580
A4249
_RS15585
A4249
_RS15590
A4249
_RS15595
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.2
+0.0
-0.3
-0.8
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.2
+0.0
-0.5
-0.2
carbon source
Adenine 0.74 mM (C)
-0.1
-0.1
-0.1
-0.2
-0.3
carbon source
Thymine 0.793 mM (C)
-0.1
+0.0
-0.1
-0.1
-0.5
carbon source
Cytidine 0.41115 mM (C)
-0.1
-0.0
+0.0
-0.3
-0.3
carbon source
Inosine 0.3728 mM (C)
-0.5
+0.0
+0.0
-0.1
-0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.1
-0.1
-0.1
-0.4
+0.0
carbon source
Uracil 0.8921 mM (C)
+0.0
-0.1
-0.1
-0.3
-0.2
carbon source
Guanine 0.6617 mM (C)
+0.2
-0.0
-0.0
-0.2
-0.4
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.1
-0.1
+0.2
-0.5
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.0
-0.1
-0.2
-0.2
carbon source
Uracil 0.8921 mM (C)
-0.0
-0.2
-0.1
-0.1
-0.1
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.2
-0.2
+0.1
-0.2
carbon source
Adenine 0.74 mM (C)
-0.0
+0.0
-0.1
-0.0
-0.3
carbon source
Thymine 0.793 mM (C)
-0.0
-0.1
+0.1
-0.0
-0.4
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.1
-0.0
-0.0
-0.3
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.0
+0.0
-0.1
-0.3
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.0
-0.0
-0.3
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.1
-0.2
+0.0
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.0
-0.1
-0.1
-0.3
carbon source
Cytosine 0.9 mM (C)
-0.0
-0.1
-0.0
+0.1
-0.2
carbon source
Xanthine 0.6574 mM (C)
+0.0
-0.0
+0.1
+0.0
-0.3
carbon source
Thymine 0.793 mM (C)
+0.1
-0.2
-0.1
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.1
-0.1
+0.2
-0.2
carbon source
Guanosine 0.35306 mM (C)
-0.2
-0.1
+0.1
-0.0
+0.1
carbon source
Tween 20 (C), 20C
-0.3
+0.2
-0.2
+0.3
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.2
-0.2
+0.0
+0.1
-0.2
carbon source
D-Glucose (C); 30C
-0.2
+0.3
-0.1
+0.1
+0.0
carbon source
Tween 20 (C), 30C
+0.0
+0.4
+0.1
+0.2
-0.4
carbon source
D-Glucose (C); 20C
+0.3
+0.6
+0.1
+0.5
+0.2
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