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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS15450 and A4249_RS15455 overlap by 8 nucleotides
A4249_RS15455 and A4249_RS15460 are separated by 6 nucleotides
A4249_RS15460 and A4249_RS15465 are separated by 102 nucleotides
A4249_RS15465 and A4249_RS15470 are separated by 196 nucleotides
A4249_RS15450: A4249_RS15450 - NAD(P)-dependent glycerol-3-phosphate dehydrogenase, at 3,129,376 to 3,130,374
_RS15450
A4249_RS15455: A4249_RS15455 - Rieske (2Fe-2S) protein, at 3,130,367 to 3,130,750
_RS15455
A4249_RS15460: A4249_RS15460 - polyphosphate kinase 2, at 3,130,757 to 3,131,506
_RS15460
A4249_RS15465: A4249_RS15465 - extensin family protein, at 3,131,609 to 3,132,370
_RS15465
A4249_RS15470: A4249_RS15470 - cold-shock protein, at 3,132,567 to 3,132,770
_RS15470
Group
Condition
A4249
_RS15450
A4249
_RS15455
A4249
_RS15460
A4249
_RS15465
A4249
_RS15470
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.4
+0.0
+0.1
-0.6
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.1
+0.2
-0.1
-0.8
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.3
+0.2
+0.0
-0.6
carbon source
Tween 20 (C), 20C
N.D.
+0.0
+0.2
-0.1
-0.5
carbon source
D-Glucose (C); 20C
N.D.
+0.1
+0.1
-0.0
-0.5
carbon source
Uracil 0.8921 mM (C)
N.D.
-0.3
+0.0
-0.0
-0.0
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.4
+0.1
-0.0
+0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
N.D.
-0.2
+0.0
-0.2
+0.3
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.1
+0.1
+0.0
-0.0
carbon source
Adenine 0.74 mM (C)
N.D.
+0.3
+0.0
-0.1
-0.2
carbon source
Tween 20 (C), 30C
N.D.
+0.2
+0.3
-0.1
-0.4
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.1
+0.1
-0.1
+0.2
carbon source
Adenine 0.74 mM (C)
N.D.
+0.2
+0.1
+0.0
-0.2
carbon source
Thymine 0.793 mM (C)
N.D.
+0.1
+0.0
+0.0
+0.1
carbon source
Thymine 0.793 mM (C)
N.D.
+0.3
+0.0
+0.0
-0.1
carbon source
Uracil 0.8921 mM (C)
N.D.
-0.0
-0.1
-0.0
+0.3
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
+0.4
-0.0
+0.1
-0.2
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.3
+0.1
-0.1
+0.6
carbon source
Xanthine 0.6574 mM (C)
N.D.
+0.7
-0.1
-0.1
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
+0.1
+0.2
+0.2
-0.1
carbon source
Xanthine 0.6574 mM (C)
N.D.
+0.3
+0.1
+0.0
-0.0
carbon source
Cytidine 0.41115 mM (C)
N.D.
+0.5
+0.0
-0.0
-0.1
carbon source
Inosine 0.3728 mM (C)
N.D.
+0.1
+0.3
-0.1
+0.1
carbon source
Cytosine 0.9 mM (C)
N.D.
+0.6
-0.1
-0.1
+0.0
carbon source
D-Glucose (C); 30C
N.D.
-0.4
+0.1
+0.0
+0.8
carbon source
Thymine 0.793 mM (C)
N.D.
+0.4
+0.0
+0.1
+0.1
carbon source
Inosine 0.3728 mM (C)
N.D.
+0.7
+0.2
-0.1
-0.2
carbon source
Guanosine 0.35306 mM (C)
N.D.
+0.3
+0.0
+0.1
+0.2
carbon source
Adenine 0.74 mM (C)
N.D.
+0.4
+0.1
+0.1
+0.2
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
+0.5
+0.2
+0.2
-0.0
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