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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS16830 and A4249_RS15285 are separated by 18 nucleotides
A4249_RS15285 and A4249_RS15290 are separated by 228 nucleotides
A4249_RS15290 and A4249_RS15295 overlap by 13 nucleotides
A4249_RS15295 and A4249_RS15300 are separated by 40 nucleotides
A4249_RS16830: A4249_RS16830 - hypothetical protein, at 3,094,056 to 3,094,202
_RS16830
A4249_RS15285: A4249_RS15285 - hypothetical protein, at 3,094,221 to 3,094,595
_RS15285
A4249_RS15290: A4249_RS15290 - malate synthase G, at 3,094,824 to 3,096,968
_RS15290
A4249_RS15295: A4249_RS15295 - mechanosensitive ion channel, at 3,096,956 to 3,098,005
_RS15295
A4249_RS15300: A4249_RS15300 - sulfate adenylyltransferase subunit CysN, at 3,098,046 to 3,099,959
_RS15300
Group
Condition
A4249
_RS16830
A4249
_RS15285
A4249
_RS15290
A4249
_RS15295
A4249
_RS15300
carbon source
Tween 20 (C), 30C
-0.1
+0.1
-4.4
-0.0
-4.1
carbon source
Tween 20 (C), 20C
-0.0
+0.0
-4.0
+0.2
-3.8
carbon source
D-Glucose (C); 30C
-0.7
-0.1
-0.2
+0.3
-4.6
carbon source
D-Glucose (C); 20C
-0.9
+0.4
-0.1
+0.3
-4.5
carbon source
Cytidine 0.41115 mM (C)
-0.3
-0.1
-0.3
-0.2
-0.2
carbon source
Adenine 0.74 mM (C)
-0.0
-0.7
+0.1
+0.1
-0.3
carbon source
Adenine 0.74 mM (C)
+0.0
-0.4
-0.0
+0.1
-0.3
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.3
-0.0
-0.4
+0.0
+0.2
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.1
-0.0
-0.2
-0.1
+0.1
carbon source
Adenine 0.74 mM (C)
+0.2
-0.3
-0.1
+0.1
-0.2
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.2
+0.1
+0.2
-0.1
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.2
+0.2
-0.0
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.6
+0.5
+0.2
-0.1
carbon source
Guanosine 0.35306 mM (C)
+0.4
-0.2
-0.1
+0.1
-0.1
carbon source
Guanosine 0.35306 mM (C)
+0.4
-0.1
+0.1
+0.2
-0.2
carbon source
Xanthine 0.6574 mM (C)
+0.5
-0.5
+0.1
+0.0
+0.2
carbon source
Thymine 0.793 mM (C)
+0.5
-0.5
+0.1
+0.2
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.0
+0.2
-0.1
+0.3
-0.0
carbon source
Thymine 0.793 mM (C)
+0.1
-0.0
+0.2
+0.2
-0.0
carbon source
Uracil 0.8921 mM (C)
+0.2
+0.2
+0.1
+0.1
-0.0
carbon source
Uracil 0.8921 mM (C)
+0.3
+0.0
+0.1
+0.0
+0.2
carbon source
Guanine 0.6617 mM (C)
-0.3
+0.3
+0.3
+0.3
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.2
-0.1
+0.2
+0.3
+0.2
carbon source
Inosine 0.3728 mM (C)
+0.0
-0.1
+0.3
+0.4
+0.3
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.3
+0.1
+0.3
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.3
+0.6
+0.1
+0.0
carbon source
Thymine 0.793 mM (C)
+0.4
+0.3
+0.2
+0.1
+0.0
carbon source
Cytosine 0.9 mM (C)
+0.3
+0.2
+0.2
+0.3
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.4
+0.2
+0.2
+0.4
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.4
+0.2
+0.8
-0.1
-0.1
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