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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS15055 and A4249_RS15060 overlap by 35 nucleotides
A4249_RS15060 and A4249_RS15065 are separated by 80 nucleotides
A4249_RS15065 and A4249_RS15070 are separated by 44 nucleotides
A4249_RS15070 and A4249_RS15075 are separated by 87 nucleotides
A4249_RS15055: A4249_RS15055 - SprT family zinc-dependent metalloprotease, at 3,045,959 to 3,046,681
_RS15055
A4249_RS15060: A4249_RS15060 - polyhydroxyalkanoate depolymerase, at 3,046,647 to 3,047,927
_RS15060
A4249_RS15065: A4249_RS15065 - SCO family protein, at 3,048,008 to 3,048,631
_RS15065
A4249_RS15070: A4249_RS15070 - ActS/PrrB/RegB family redox-sensitive histidine kinase, at 3,048,676 to 3,050,130
_RS15070
A4249_RS15075: A4249_RS15075 - ActR/PrrA/RegA family redox response regulator transcription factor, at 3,050,218 to 3,050,772
_RS15075
Group
Condition
A4249
_RS15055
A4249
_RS15060
A4249
_RS15065
A4249
_RS15070
A4249
_RS15075
carbon source
Inosine 0.3728 mM (C)
-0.5
-0.4
-0.2
-0.2
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.3
-0.0
-0.4
+0.0
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
-0.6
-0.3
+0.3
-0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.5
-0.2
+0.0
-0.0
-0.0
carbon source
Thymine 0.793 mM (C)
-0.2
-0.1
-0.1
-0.1
-0.2
carbon source
Guanine 0.6617 mM (C)
-0.7
-0.1
+0.2
-0.0
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.1
-0.0
-0.2
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
-0.1
-0.1
-0.1
-0.3
carbon source
Inosine 0.3728 mM (C)
+0.0
-0.2
-0.0
-0.2
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.3
-0.1
+0.1
-0.0
-0.0
carbon source
Adenine 0.74 mM (C)
-0.1
-0.1
-0.1
-0.0
-0.0
carbon source
Xanthine 0.6574 mM (C)
-0.4
-0.2
+0.2
-0.0
+0.1
carbon source
Uracil 0.8921 mM (C)
-0.2
-0.1
+0.0
-0.0
+0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.1
-0.2
+0.1
-0.1
+0.1
carbon source
Adenine 0.74 mM (C)
+0.1
-0.1
-0.2
-0.1
+0.1
carbon source
Xanthine 0.6574 mM (C)
-0.2
-0.1
+0.1
-0.0
+0.0
carbon source
Cytidine 0.41115 mM (C)
+0.3
-0.0
-0.1
-0.1
-0.2
carbon source
Thymine 0.793 mM (C)
+0.2
-0.0
-0.1
-0.1
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.0
+0.1
-0.0
-0.1
carbon source
Adenine 0.74 mM (C)
+0.2
-0.0
-0.2
-0.1
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
-0.0
+0.2
-0.1
+0.1
carbon source
Thymine 0.793 mM (C)
+0.1
-0.0
+0.1
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.2
-0.1
+0.1
-0.0
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.1
+0.1
-0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.1
+0.2
+0.0
+0.1
carbon source
Tween 20 (C), 20C
+0.1
-0.1
+0.3
+0.2
-0.0
carbon source
Uracil 0.8921 mM (C)
+0.3
+0.0
+0.1
-0.1
+0.1
carbon source
D-Glucose (C); 20C
+0.4
+0.0
+0.4
-0.0
+0.0
carbon source
D-Glucose (C); 30C
+0.2
+0.0
+0.7
+0.1
+0.1
carbon source
Tween 20 (C), 30C
+0.4
-0.0
+0.5
+0.3
+0.3
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