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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS14970 and A4249_RS14975 are separated by 68 nucleotides
A4249_RS14975 and A4249_RS14980 are separated by 47 nucleotides
A4249_RS14980 and A4249_RS14985 overlap by 1 nucleotides
A4249_RS14985 and A4249_RS14990 are separated by 71 nucleotides
A4249_RS14970: A4249_RS14970 - phasin, at 3,028,962 to 3,029,360
_RS14970
A4249_RS14975: A4249_RS14975 - creatininase family protein, at 3,029,429 to 3,030,202
_RS14975
A4249_RS14980: A4249_RS14980 - TetR/AcrR family transcriptional regulator, at 3,030,250 to 3,030,867
_RS14980
A4249_RS14985: A4249_RS14985 - DHA2 family efflux MFS transporter permease subunit, at 3,030,867 to 3,032,402
_RS14985
A4249_RS14990: A4249_RS14990 - HlyD family secretion protein, at 3,032,474 to 3,033,559
_RS14990
Group
Condition
A4249
_RS14970
A4249
_RS14975
A4249
_RS14980
A4249
_RS14985
A4249
_RS14990
carbon source
Tween 20 (C), 20C
-0.0
-0.4
-1.0
-0.0
+0.0
carbon source
D-Glucose (C); 20C
-0.4
-0.3
-0.6
+0.0
+0.1
carbon source
D-Glucose (C); 30C
+0.3
-0.1
-1.7
+0.3
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.2
+0.2
-0.6
-0.1
carbon source
Tween 20 (C), 30C
+0.4
-0.0
-1.1
+0.1
+0.2
carbon source
Adenine 0.74 mM (C)
-0.2
-0.3
+0.2
-0.1
-0.0
carbon source
Cytosine 0.9 mM (C)
-0.3
-0.3
+0.4
-0.1
-0.1
carbon source
Thymine 0.793 mM (C)
+0.1
+0.1
+0.0
-0.3
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
+0.2
-0.0
-0.5
-0.1
carbon source
Cytidine 0.41115 mM (C)
+0.2
-0.7
+0.2
+0.2
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.3
+0.1
+0.3
-0.3
+0.1
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.1
+0.3
-0.0
-0.1
carbon source
Xanthine 0.6574 mM (C)
+0.3
-0.3
+0.1
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
+0.1
+0.2
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
-0.4
+0.6
-0.1
-0.0
carbon source
Adenine 0.74 mM (C)
-0.1
+0.2
+0.2
-0.0
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.2
+0.3
-0.0
+0.0
carbon source
Adenine 0.74 mM (C)
-0.0
-0.2
+0.5
+0.0
-0.1
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.2
+0.0
-0.2
-0.0
carbon source
Guanine 0.6617 mM (C)
-0.2
-0.1
+0.3
-0.0
+0.2
carbon source
Uracil 0.8921 mM (C)
+0.0
+0.0
+0.2
+0.1
-0.1
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.3
-0.0
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
-0.1
+0.2
+0.0
+0.1
carbon source
Thymine 0.793 mM (C)
+0.2
+0.0
+0.4
-0.2
+0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
+0.3
+0.0
+0.2
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.1
+0.3
+0.1
-0.1
carbon source
Xanthine 0.6574 mM (C)
+0.1
-0.0
+0.5
+0.2
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
+0.3
+0.3
+0.3
-0.1
carbon source
Inosine 0.3728 mM (C)
+0.5
-0.0
+0.4
-0.1
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.2
+0.1
+0.4
+0.1
+0.1
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A4249_RS14980
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