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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS14670 and A4249_RS14675 are separated by 7 nucleotides
A4249_RS14675 and A4249_RS14680 are separated by 130 nucleotides
A4249_RS14680 and A4249_RS14685 overlap by 4 nucleotides
A4249_RS14685 and A4249_RS14690 are separated by 37 nucleotides
A4249_RS14670: A4249_RS14670 - MarC family protein, at 2,971,255 to 2,971,950
_RS14670
A4249_RS14675: A4249_RS14675 - metallopeptidase family protein, at 2,971,958 to 2,972,356
_RS14675
A4249_RS14680: A4249_RS14680 - PAS domain-containing sensor histidine kinase, at 2,972,487 to 2,974,808
_RS14680
A4249_RS14685: A4249_RS14685 - M28 family metallopeptidase, at 2,974,805 to 2,976,451
_RS14685
A4249_RS14690: A4249_RS14690 - TIGR03862 family flavoprotein, at 2,976,489 to 2,977,718
_RS14690
Group
Condition
A4249
_RS14670
A4249
_RS14675
A4249
_RS14680
A4249
_RS14685
A4249
_RS14690
carbon source
Thymine 0.793 mM (C)
N.D.
-0.1
-0.4
+0.0
-0.2
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.1
-0.3
-0.1
-0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
N.D.
-0.0
-0.3
-0.2
-0.1
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.4
+0.2
-0.1
-0.2
carbon source
Uracil 0.8921 mM (C)
N.D.
-0.2
-0.2
-0.1
-0.1
carbon source
Adenine 0.74 mM (C)
N.D.
-0.1
-0.4
+0.0
-0.0
carbon source
Xanthine 0.6574 mM (C)
N.D.
-0.3
-0.1
-0.0
-0.1
carbon source
Thymine 0.793 mM (C)
N.D.
+0.0
-0.2
-0.0
-0.2
carbon source
Xanthine 0.6574 mM (C)
N.D.
-0.0
-0.2
-0.0
-0.1
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.1
+0.0
-0.1
-0.2
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.2
+0.2
-0.0
-0.2
carbon source
Uracil 0.8921 mM (C)
N.D.
-0.1
+0.0
+0.1
-0.2
carbon source
Inosine 0.3728 mM (C)
N.D.
-0.4
+0.6
-0.1
-0.3
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.1
-0.1
-0.1
+0.1
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.4
+0.4
-0.0
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.1
+0.3
+0.1
-0.2
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.2
+0.5
-0.0
-0.2
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.1
+0.3
-0.1
-0.0
carbon source
Adenine 0.74 mM (C)
N.D.
+0.1
+0.1
+0.0
-0.2
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.1
+0.3
+0.0
-0.1
carbon source
D-Glucose (C); 30C
N.D.
-0.7
+0.7
-0.0
+0.2
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.2
+0.3
+0.1
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
N.D.
-0.0
+0.3
-0.0
-0.1
carbon source
Adenine 0.74 mM (C)
N.D.
+0.1
+0.1
+0.1
-0.1
carbon source
Cytidine 0.41115 mM (C)
N.D.
+0.0
+0.4
-0.0
-0.1
carbon source
Tween 20 (C), 20C
N.D.
+0.1
+0.1
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.0
+0.4
+0.1
+0.1
carbon source
Tween 20 (C), 30C
N.D.
-0.3
+0.8
+0.1
-0.0
carbon source
D-Glucose (C); 20C
N.D.
+0.1
+0.5
-0.0
+0.1
carbon source
Inosine 0.3728 mM (C)
N.D.
-0.3
+1.4
+0.0
+0.0
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