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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS14480 and A4249_RS14485 are separated by 112 nucleotides
A4249_RS14485 and A4249_RS14490 are separated by 44 nucleotides
A4249_RS14490 and A4249_RS14495 are separated by 56 nucleotides
A4249_RS14495 and A4249_RS14500 are separated by 185 nucleotides
A4249_RS14480: A4249_RS14480 - helix-turn-helix domain-containing protein, at 2,928,897 to 2,930,000
_RS14480
A4249_RS14485: A4249_RS14485 - phosphoenolpyruvate--protein phosphotransferase, at 2,930,113 to 2,932,389
_RS14485
A4249_RS14490: A4249_RS14490 - aspartate kinase, at 2,932,434 to 2,933,708
_RS14490
A4249_RS14495: A4249_RS14495 - bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG, at 2,933,765 to 2,934,580
_RS14495
A4249_RS14500: A4249_RS14500 - oligopeptide transporter, OPT family, at 2,934,766 to 2,936,817
_RS14500
Group
Condition
A4249
_RS14480
A4249
_RS14485
A4249
_RS14490
A4249
_RS14495
A4249
_RS14500
carbon source
D-Glucose (C); 30C
-0.4
-2.1
N.D.
N.D.
+0.4
carbon source
D-Glucose (C); 20C
-0.1
-1.1
N.D.
N.D.
+0.2
carbon source
Tween 20 (C), 20C
+0.2
-1.2
N.D.
N.D.
+0.2
carbon source
Tween 20 (C), 30C
+0.4
-1.5
N.D.
N.D.
+0.3
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.1
N.D.
N.D.
-0.0
carbon source
Cytidine 0.41115 mM (C)
+0.3
-0.3
N.D.
N.D.
-0.1
carbon source
Adenine 0.74 mM (C)
+0.1
-0.1
N.D.
N.D.
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.2
-0.1
N.D.
N.D.
-0.2
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.2
-0.3
N.D.
N.D.
-0.0
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
N.D.
N.D.
-0.0
carbon source
Uracil 0.8921 mM (C)
-0.1
+0.1
N.D.
N.D.
+0.0
carbon source
Adenine 0.74 mM (C)
+0.0
+0.1
N.D.
N.D.
-0.1
carbon source
Thymine 0.793 mM (C)
-0.1
+0.3
N.D.
N.D.
-0.1
carbon source
Xanthine 0.6574 mM (C)
+0.1
+0.1
N.D.
N.D.
-0.0
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.2
N.D.
N.D.
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.0
+0.2
N.D.
N.D.
-0.1
carbon source
Cytosine 0.9 mM (C)
+0.2
+0.0
N.D.
N.D.
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.0
+0.3
N.D.
N.D.
-0.1
carbon source
Adenine 0.74 mM (C)
-0.0
+0.3
N.D.
N.D.
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.3
N.D.
N.D.
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
+0.5
N.D.
N.D.
-0.1
carbon source
Cytosine 0.9 mM (C)
+0.1
+0.4
N.D.
N.D.
-0.0
carbon source
Xanthine 0.6574 mM (C)
+0.2
+0.4
N.D.
N.D.
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
+0.8
N.D.
N.D.
-0.2
carbon source
Guanosine 0.35306 mM (C)
+0.3
+0.5
N.D.
N.D.
-0.1
carbon source
Guanosine 0.35306 mM (C)
+0.4
+0.4
N.D.
N.D.
+0.0
carbon source
Inosine 0.3728 mM (C)
+0.3
+0.6
N.D.
N.D.
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
+0.8
N.D.
N.D.
-0.1
carbon source
Guanosine 0.35306 mM (C)
+0.4
+0.8
N.D.
N.D.
-0.2
carbon source
Inosine 0.3728 mM (C)
+0.3
+1.3
N.D.
N.D.
-0.2
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