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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS14380 and A4249_RS14385 are separated by 33 nucleotides
A4249_RS14385 and A4249_RS14390 are separated by 70 nucleotides
A4249_RS14390 and A4249_RS14395 are separated by 79 nucleotides
A4249_RS14395 and A4249_RS16980 are separated by 71 nucleotides
A4249_RS14380: A4249_RS14380 - YnbE family lipoprotein, at 2,907,589 to 2,907,777
_RS14380
A4249_RS14385: A4249_RS14385 - DUF1318 domain-containing protein, at 2,907,811 to 2,908,170
_RS14385
A4249_RS14390: A4249_RS14390 - DNA cytosine methyltransferase, at 2,908,241 to 2,909,371
_RS14390
A4249_RS14395: A4249_RS14395 - hypothetical protein, at 2,909,451 to 2,909,906
_RS14395
A4249_RS16980: A4249_RS16980 - LytTR family transcriptional regulator DNA-binding domain-containing protein, at 2,909,978 to 2,910,091
_RS16980
Group
Condition
A4249
_RS14380
A4249
_RS14385
A4249
_RS14390
A4249
_RS14395
A4249
_RS16980
carbon source
Tween 20 (C), 30C
+0.2
-4.1
-1.1
-0.1
N.D.
carbon source
Tween 20 (C), 20C
+0.2
-2.4
-1.2
-0.0
N.D.
carbon source
D-Glucose (C); 30C
+0.1
-0.0
-1.8
-0.4
N.D.
carbon source
D-Glucose (C); 20C
-0.1
+0.1
-1.6
-0.3
N.D.
carbon source
Thymine 0.793 mM (C)
-0.4
+0.1
-0.1
-0.1
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.3
+0.2
-0.1
-0.3
N.D.
carbon source
Thymine 0.793 mM (C)
-0.1
+0.1
+0.0
-0.3
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.0
+0.1
-0.2
-0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
+0.0
-0.1
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
+0.3
-0.1
-0.2
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.1
+0.5
+0.2
-0.7
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.0
-0.0
+0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.3
+0.0
-0.3
+0.5
N.D.
carbon source
Thymine 0.793 mM (C)
-0.0
-0.2
-0.0
+0.2
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
+0.1
-0.0
+0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.2
-0.1
+0.4
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.5
+0.2
+0.1
-0.5
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.3
-0.1
-0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.3
+0.1
+0.0
-0.2
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.1
+0.1
+0.0
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.1
+0.0
+0.1
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.0
+0.3
-0.0
+0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
-0.1
+0.4
+0.1
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
+0.5
+0.2
-0.4
N.D.
carbon source
Uracil 0.8921 mM (C)
-0.2
+0.2
+0.4
+0.1
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.1
+0.5
-0.3
+0.3
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.3
-0.2
+0.2
+0.3
N.D.
carbon source
Cytidine 0.41115 mM (C)
-0.3
+0.2
+0.2
+0.5
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.2
+0.3
-0.1
+0.6
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.3
+0.5
+0.1
N.D.
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