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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS13985 and A4249_RS13990 are separated by 139 nucleotides
A4249_RS13990 and A4249_RS13995 overlap by 1 nucleotides
A4249_RS13995 and A4249_RS14000 are separated by 18 nucleotides
A4249_RS14000 and A4249_RS14005 are separated by 108 nucleotides
A4249_RS13985: A4249_RS13985 - DUF1993 domain-containing protein, at 2,820,141 to 2,820,635
_RS13985
A4249_RS13990: A4249_RS13990 - ribosome maturation factor RimP, at 2,820,775 to 2,821,374
_RS13990
A4249_RS13995: A4249_RS13995 - transcription termination factor NusA, at 2,821,374 to 2,823,107
_RS13995
A4249_RS14000: A4249_RS14000 - RNA-binding protein, at 2,823,126 to 2,823,785
_RS14000
A4249_RS14005: A4249_RS14005 - translation initiation factor IF-2, at 2,823,894 to 2,826,920
_RS14005
Group
Condition
A4249
_RS13985
A4249
_RS13990
A4249
_RS13995
A4249
_RS14000
A4249
_RS14005
carbon source
Adenine 0.74 mM (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Tween 20 (C), 30C
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Cytidine 0.41115 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); 30C
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Xanthine 0.6574 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Xanthine 0.6574 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); 20C
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.3
N.D.
N.D.
N.D.
N.D.
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