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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS13255 and A4249_RS13260 are separated by 37 nucleotides
A4249_RS13260 and A4249_RS13265 are separated by 37 nucleotides
A4249_RS13265 and A4249_RS13270 overlap by 4 nucleotides
A4249_RS13270 and A4249_RS13275 are separated by 102 nucleotides
A4249_RS13255: A4249_RS13255 - threonine/serine dehydratase, at 2,672,464 to 2,673,444
_RS13255
A4249_RS13260: A4249_RS13260 - glycerol kinase GlpK, at 2,673,482 to 2,675,011
_RS13260
A4249_RS13265: A4249_RS13265 - phosphotransferase family protein, at 2,675,049 to 2,676,125
_RS13265
A4249_RS13270: A4249_RS13270 - DUF1223 domain-containing protein, at 2,676,122 to 2,676,877
_RS13270
A4249_RS13275: A4249_RS13275 - prolyl oligopeptidase family serine peptidase, at 2,676,980 to 2,679,199
_RS13275
Group
Condition
A4249
_RS13255
A4249
_RS13260
A4249
_RS13265
A4249
_RS13270
A4249
_RS13275
carbon source
Inosine 0.3728 mM (C)
-0.3
-0.1
+0.0
-0.0
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.1
-0.1
-0.1
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.1
+0.0
-0.1
-0.1
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.2
-0.1
-0.1
+0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.1
-0.0
+0.0
-0.0
carbon source
Xanthine 0.6574 mM (C)
+0.1
+0.0
-0.0
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.2
-0.1
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.2
+0.2
-0.0
-0.1
+0.1
carbon source
Thymine 0.793 mM (C)
-0.1
+0.1
-0.0
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.2
-0.0
+0.0
-0.0
carbon source
Uracil 0.8921 mM (C)
-0.1
+0.2
-0.0
+0.1
-0.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
+0.0
-0.1
+0.1
+0.1
carbon source
Inosine 0.3728 mM (C)
-0.0
+0.3
-0.2
-0.0
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.3
-0.1
-0.1
+0.0
carbon source
Uracil 0.8921 mM (C)
-0.2
+0.3
-0.1
+0.1
+0.0
carbon source
Cytidine 0.41115 mM (C)
-0.0
+0.1
-0.0
+0.0
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.2
+0.0
-0.0
-0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
-0.1
+0.0
+0.2
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.2
-0.0
+0.2
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.1
+0.1
+0.0
+0.0
+0.0
carbon source
Adenine 0.74 mM (C)
-0.1
+0.2
+0.1
+0.0
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
-0.1
+0.1
+0.1
+0.1
carbon source
D-Glucose (C); 20C
+0.2
-0.1
+0.0
+0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.1
+0.1
+0.1
+0.1
+0.1
carbon source
D-Glucose (C); 30C
+0.3
-0.1
+0.1
+0.0
+0.0
carbon source
Adenine 0.74 mM (C)
+0.1
+0.2
-0.0
+0.0
+0.1
carbon source
Adenine 0.74 mM (C)
-0.0
+0.2
-0.0
+0.1
+0.1
carbon source
Tween 20 (C), 20C
+0.2
-0.0
+0.1
+0.3
-0.0
carbon source
Tween 20 (C), 30C
+0.1
-0.1
+0.1
+0.4
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
+0.5
+0.0
+0.0
+0.0
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