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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS11600 and A4249_RS16630 overlap by 1 nucleotides
A4249_RS16630 and A4249_RS11605 overlap by 4 nucleotides
A4249_RS11605 and A4249_RS11610 are separated by 315 nucleotides
A4249_RS11610 and A4249_RS11615 are separated by 179 nucleotides
A4249_RS11600: A4249_RS11600 - cytochrome d ubiquinol oxidase subunit II, at 2,332,557 to 2,333,558
_RS11600
A4249_RS16630: A4249_RS16630 - DUF2474 family protein, at 2,333,558 to 2,333,686
_RS16630
A4249_RS11605: A4249_RS11605 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,333,683 to 2,334,168
_RS11605
A4249_RS11610: A4249_RS11610 - alginate export family protein, at 2,334,484 to 2,335,026
_RS11610
A4249_RS11615: A4249_RS11615 - TnsA endonuclease N-terminal domain-containing protein, at 2,335,206 to 2,335,847
_RS11615
Group
Condition
A4249
_RS11600
A4249
_RS16630
A4249
_RS11605
A4249
_RS11610
A4249
_RS11615
carbon source
D-Glucose (C); 30C
+0.3
-0.6
-0.3
-0.2
+0.1
carbon source
Cytidine 0.41115 mM (C)
-0.1
+0.1
-0.3
-0.4
+0.1
carbon source
D-Glucose (C); 20C
-0.0
-0.1
-0.1
-0.4
+0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
-0.2
-0.4
-0.1
+0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.3
-0.2
+0.0
+0.1
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.3
+0.1
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.1
-0.3
-0.1
-0.2
+0.1
carbon source
Tween 20 (C), 20C
-0.0
-0.2
+0.3
-0.4
+0.0
carbon source
Adenine 0.74 mM (C)
-0.3
-0.0
+0.1
+0.0
+0.0
carbon source
Tween 20 (C), 30C
+0.1
-0.2
+0.1
-0.2
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.3
-0.0
-0.2
+0.1
carbon source
Uracil 0.8921 mM (C)
-0.1
+0.2
+0.1
-0.1
-0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.3
+0.1
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.0
+0.1
+0.1
+0.0
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
+0.5
-0.2
-0.0
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.2
+0.6
-0.1
-0.4
-0.0
carbon source
Thymine 0.793 mM (C)
+0.0
+0.3
-0.2
+0.1
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.1
+0.4
+0.1
-0.2
+0.0
carbon source
Adenine 0.74 mM (C)
+0.0
+0.5
-0.1
-0.1
+0.0
carbon source
Inosine 0.3728 mM (C)
-0.0
+0.5
-0.1
+0.0
-0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.2
+0.3
-0.0
+0.1
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.3
+0.0
-0.0
+0.1
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.4
+0.2
-0.1
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.6
+0.2
-0.2
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.1
+0.2
+0.2
+0.1
carbon source
Adenine 0.74 mM (C)
-0.1
+0.7
+0.1
+0.1
-0.1
carbon source
Thymine 0.793 mM (C)
+0.0
+0.5
+0.3
-0.1
+0.0
carbon source
Uracil 0.8921 mM (C)
+0.1
+0.3
+0.3
+0.1
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
+0.3
+0.2
-0.0
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.2
+0.4
+0.0
+0.1
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