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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS11475 and A4249_RS11480 overlap by 4 nucleotides
A4249_RS11480 and A4249_RS11485 are separated by 93 nucleotides
A4249_RS11485 and A4249_RS11490 are separated by 398 nucleotides
A4249_RS11490 and A4249_RS11495 overlap by 4 nucleotides
A4249_RS11475: A4249_RS11475 - ligase-associated DNA damage response DEXH box helicase, at 2,309,012 to 2,311,426
_RS11475
A4249_RS11480: A4249_RS11480 - ligase-associated DNA damage response endonuclease PdeM, at 2,311,423 to 2,312,175
_RS11480
A4249_RS11485: A4249_RS11485 - hypothetical protein, at 2,312,269 to 2,312,730
_RS11485
A4249_RS11490: A4249_RS11490 - sensor histidine kinase N-terminal domain-containing protein, at 2,313,129 to 2,314,460
_RS11490
A4249_RS11495: A4249_RS11495 - response regulator transcription factor, at 2,314,457 to 2,315,110
_RS11495
Group
Condition
A4249
_RS11475
A4249
_RS11480
A4249
_RS11485
A4249
_RS11490
A4249
_RS11495
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.0
+0.0
-0.1
-0.3
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.1
-0.1
-0.1
-0.1
carbon source
Guanine 0.6617 mM (C)
-0.2
+0.1
-0.1
+0.1
-0.2
carbon source
D-Glucose (C); 20C
+0.1
+0.1
+0.1
-0.1
-0.4
carbon source
Thymine 0.793 mM (C)
+0.1
+0.1
-0.2
-0.0
-0.2
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.0
-0.2
-0.1
+0.0
+0.1
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.1
+0.2
-0.0
-0.1
carbon source
Adenine 0.74 mM (C)
+0.1
-0.0
-0.1
+0.0
-0.1
carbon source
Tween 20 (C), 20C
+0.0
+0.2
-0.2
+0.1
-0.2
carbon source
Cytidine 0.41115 mM (C)
+0.1
-0.1
+0.1
-0.1
-0.0
carbon source
Adenine 0.74 mM (C)
+0.1
-0.1
-0.0
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
+0.3
-0.2
+0.0
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.1
+0.1
-0.2
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.2
-0.2
+0.3
-0.2
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.0
-0.1
+0.1
+0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.1
-0.1
+0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.1
+0.2
+0.1
-0.3
carbon source
Uracil 0.8921 mM (C)
-0.0
+0.2
+0.0
-0.1
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
+0.1
+0.1
+0.1
-0.3
carbon source
Thymine 0.793 mM (C)
+0.1
+0.1
-0.0
+0.0
+0.0
carbon source
Thymine 0.793 mM (C)
+0.0
+0.3
-0.0
-0.1
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.0
+0.2
-0.0
+0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.2
-0.1
+0.3
-0.1
carbon source
Xanthine 0.6574 mM (C)
+0.0
+0.3
+0.0
+0.0
-0.1
carbon source
Tween 20 (C), 30C
-0.0
+0.3
+0.1
+0.1
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.1
+0.0
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
-0.1
-0.0
+0.2
+0.2
carbon source
Adenine 0.74 mM (C)
+0.2
+0.2
+0.2
-0.1
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.1
+0.3
-0.1
+0.3
+0.1
carbon source
D-Glucose (C); 30C
+0.2
+0.1
+0.4
+0.2
-0.3
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