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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS10880 and A4249_RS10885 are separated by 281 nucleotides
A4249_RS10885 and A4249_RS10890 are separated by 0 nucleotides
A4249_RS10890 and A4249_RS10895 are separated by 23 nucleotides
A4249_RS10895 and A4249_RS10900 are separated by 328 nucleotides
A4249_RS10880: A4249_RS10880 - oligopeptide:H+ symporter, at 2,187,460 to 2,189,394
_RS10880
A4249_RS10885: A4249_RS10885 - hypothetical protein, at 2,189,676 to 2,190,827
_RS10885
A4249_RS10890: A4249_RS10890 - large-conductance mechanosensitive channel protein MscL, at 2,190,828 to 2,191,250
_RS10890
A4249_RS10895: A4249_RS10895 - integration host factor subunit beta, at 2,191,274 to 2,191,564
_RS10895
A4249_RS10900: A4249_RS10900 - 30S ribosomal protein S1, at 2,191,893 to 2,193,596
_RS10900
Group
Condition
A4249
_RS10880
A4249
_RS10885
A4249
_RS10890
A4249
_RS10895
A4249
_RS10900
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.1
-0.1
-0.2
N.D.
N.D.
carbon source
Cytidine 0.41115 mM (C)
-0.1
-0.2
-0.2
N.D.
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.2
-0.0
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.2
+0.1
-0.1
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
+0.1
-0.1
N.D.
N.D.
carbon source
Xanthine 0.6574 mM (C)
+0.0
-0.2
+0.1
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.0
-0.0
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
-0.0
+0.1
-0.1
N.D.
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.2
-0.1
+0.2
N.D.
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.1
+0.0
+0.1
N.D.
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.0
-0.0
+0.1
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.0
+0.1
+0.0
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.0
+0.0
N.D.
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.0
+0.1
+0.0
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.1
+0.1
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
-0.1
+0.0
+0.1
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.2
+0.1
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
-0.0
+0.1
+0.1
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
+0.0
+0.1
+0.0
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.0
+0.1
N.D.
N.D.
carbon source
D-Glucose (C); 30C
-0.3
+0.5
+0.0
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
+0.1
+0.1
+0.0
N.D.
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.1
+0.0
+0.1
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.3
-0.1
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
-0.0
+0.1
N.D.
N.D.
carbon source
D-Glucose (C); 20C
-0.1
+0.2
+0.2
N.D.
N.D.
carbon source
Tween 20 (C), 30C
-0.1
+0.3
+0.2
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.1
+0.2
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.1
+0.1
+0.2
N.D.
N.D.
carbon source
Tween 20 (C), 20C
-0.0
+0.3
+0.2
N.D.
N.D.
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