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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS10390 and A4249_RS10395 are separated by 168 nucleotides
A4249_RS10395 and A4249_RS10400 are separated by 10 nucleotides
A4249_RS10400 and A4249_RS10405 are separated by 80 nucleotides
A4249_RS10405 and A4249_RS10410 are separated by 227 nucleotides
A4249_RS10390: A4249_RS10390 - translation elongation factor 4, at 2,083,514 to 2,085,322
_RS10390
A4249_RS10395: A4249_RS10395 - efflux RND transporter periplasmic adaptor subunit, at 2,085,491 to 2,086,642
_RS10395
A4249_RS10400: A4249_RS10400 - efflux RND transporter permease subunit, at 2,086,653 to 2,089,856
_RS10400
A4249_RS10405: A4249_RS10405 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 2,089,937 to 2,090,920
_RS10405
A4249_RS10410: A4249_RS10410 - TonB-dependent receptor, at 2,091,148 to 2,093,787
_RS10410
Group
Condition
A4249
_RS10390
A4249
_RS10395
A4249
_RS10400
A4249
_RS10405
A4249
_RS10410
carbon source
Tween 20 (C), 20C
-2.6
-0.2
+0.1
+0.0
+0.2
carbon source
Inosine 0.3728 mM (C)
-2.0
-0.1
+0.1
-0.0
+0.0
carbon source
D-Glucose (C); 20C
-2.0
-0.1
+0.1
-0.2
+0.0
carbon source
Cytidine 0.41115 mM (C)
-1.2
-0.2
-0.0
+0.1
-0.1
carbon source
Guanosine 0.35306 mM (C)
-1.3
-0.0
-0.1
-0.2
+0.1
carbon source
Guanine 0.6617 mM (C)
-1.3
-0.2
+0.0
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.9
-0.2
-0.1
-0.1
+0.0
carbon source
Adenine 0.74 mM (C)
-1.0
-0.0
+0.0
-0.0
+0.0
carbon source
D-Glucose (C); 30C
-0.5
-0.2
+0.1
+0.0
-0.3
carbon source
Xanthine 0.6574 mM (C)
-0.8
-0.1
-0.1
+0.1
+0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.7
-0.1
+0.0
+0.1
-0.0
carbon source
Tween 20 (C), 30C
-0.5
-0.0
+0.1
-0.1
-0.1
carbon source
Adenine 0.74 mM (C)
-0.8
-0.0
+0.0
+0.1
+0.1
carbon source
Uracil 0.8921 mM (C)
-0.7
+0.0
+0.0
-0.0
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.5
-0.0
-0.1
+0.0
-0.0
carbon source
Thymine 0.793 mM (C)
-0.8
+0.1
+0.0
+0.0
+0.2
carbon source
Hypoxanthine 0.7347 mM (C)
-0.4
-0.0
-0.0
+0.0
+0.0
carbon source
Thymine 0.793 mM (C)
-0.5
-0.1
-0.0
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.5
-0.0
-0.0
+0.2
+0.0
carbon source
Uracil 0.8921 mM (C)
-0.4
-0.0
-0.0
+0.1
-0.0
carbon source
Inosine 0.3728 mM (C)
-0.5
+0.1
+0.0
-0.1
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.2
-0.2
-0.0
+0.0
+0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.3
+0.0
-0.0
+0.1
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.4
+0.1
-0.1
+0.1
+0.1
carbon source
Cytosine 0.9 mM (C)
-0.4
+0.1
+0.0
-0.0
+0.1
carbon source
Thymine 0.793 mM (C)
-0.2
-0.0
+0.0
+0.0
+0.1
carbon source
Xanthine 0.6574 mM (C)
-0.2
-0.1
+0.0
+0.0
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.2
-0.1
-0.0
+0.1
+0.1
carbon source
Adenine 0.74 mM (C)
+0.2
+0.0
-0.0
-0.2
+0.1
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.1
+0.0
+0.1
+0.1
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A4249_RS10400
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