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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS10260 and A4249_RS10265 are separated by 133 nucleotides
A4249_RS10265 and A4249_RS10270 are separated by 153 nucleotides
A4249_RS10270 and A4249_RS10275 overlap by 4 nucleotides
A4249_RS10275 and A4249_RS10280 are separated by 84 nucleotides
A4249_RS10260: A4249_RS10260 - LytTR family DNA-binding domain-containing protein, at 2,060,223 to 2,060,987
_RS10260
A4249_RS10265: A4249_RS10265 - hypothetical protein, at 2,061,121 to 2,062,110
_RS10265
A4249_RS10270: A4249_RS10270 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 2,062,264 to 2,063,559
_RS10270
A4249_RS10275: A4249_RS10275 - Lrp/AsnC family transcriptional regulator, at 2,063,556 to 2,064,038
_RS10275
A4249_RS10280: A4249_RS10280 - DMT family transporter, at 2,064,123 to 2,065,031
_RS10280
Group
Condition
A4249
_RS10260
A4249
_RS10265
A4249
_RS10270
A4249
_RS10275
A4249
_RS10280
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
-0.1
-0.3
-0.1
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.1
-0.1
-0.0
-0.2
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
-0.2
+0.1
-0.3
+0.0
carbon source
Thymine 0.793 mM (C)
-0.1
-0.0
+0.0
-0.0
-0.2
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.0
-0.1
-0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
-0.1
-0.2
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.2
-0.0
-0.0
-0.2
-0.1
carbon source
Thymine 0.793 mM (C)
+0.0
-0.0
-0.2
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.2
+0.2
+0.0
-0.2
carbon source
Adenine 0.74 mM (C)
+0.1
+0.1
-0.1
+0.0
-0.2
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.1
+0.0
+0.1
-0.0
carbon source
Guanine 0.6617 mM (C)
+0.1
-0.1
+0.0
-0.0
+0.0
carbon source
Adenine 0.74 mM (C)
+0.1
-0.0
-0.0
+0.0
-0.0
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.1
+0.1
+0.0
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
+0.0
-0.1
-0.0
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.1
-0.1
+0.2
-0.0
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.2
-0.2
-0.1
+0.2
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.2
-0.1
+0.1
+0.0
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.0
-0.1
+0.3
-0.0
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.2
+0.1
+0.0
carbon source
Adenine 0.74 mM (C)
+0.1
-0.0
-0.2
+0.2
+0.2
carbon source
D-Glucose (C); 20C
+0.3
+0.2
+0.4
-0.4
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.2
-0.0
+0.0
+0.1
+0.0
carbon source
D-Glucose (C); 30C
+0.3
+0.2
+0.4
-0.2
-0.1
carbon source
Tween 20 (C), 20C
+0.2
+0.2
+0.2
-0.2
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.3
+0.1
+0.1
+0.1
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.0
+0.1
-0.1
+0.4
+0.2
carbon source
Inosine 0.3728 mM (C)
+0.3
+0.0
+0.0
-0.1
+0.3
carbon source
Cytidine 0.41115 mM (C)
+0.3
+0.1
+0.1
-0.0
+0.1
carbon source
Tween 20 (C), 30C
+0.2
+0.2
+0.3
-0.1
+0.2
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A4249_RS10270
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A4249_RS10280
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