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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS10055 and A4249_RS10060 are separated by 83 nucleotides
A4249_RS10060 and A4249_RS10065 are separated by 230 nucleotides
A4249_RS10065 and A4249_RS10070 are separated by 47 nucleotides
A4249_RS10070 and A4249_RS10075 are separated by 107 nucleotides
A4249_RS10055: A4249_RS10055 - DUF2799 domain-containing protein, at 2,019,300 to 2,019,935
_RS10055
A4249_RS10060: A4249_RS10060 - RluA family pseudouridine synthase, at 2,020,019 to 2,021,038
_RS10060
A4249_RS10065: A4249_RS10065 - RNA polymerase sigma factor RpoH, at 2,021,269 to 2,022,156
_RS10065
A4249_RS10070: A4249_RS10070 - response regulator, at 2,022,204 to 2,023,016
_RS10070
A4249_RS10075: A4249_RS10075 - adenylosuccinate synthase, at 2,023,124 to 2,024,419
_RS10075
Group
Condition
A4249
_RS10055
A4249
_RS10060
A4249
_RS10065
A4249
_RS10070
A4249
_RS10075
carbon source
Cytidine 0.41115 mM (C)
-0.1
-0.8
N.D.
-0.1
N.D.
carbon source
D-Glucose (C); 30C
+0.0
-0.6
N.D.
-0.2
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.5
N.D.
-0.1
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.2
N.D.
-0.2
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.2
-0.3
N.D.
-0.1
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.3
N.D.
-0.1
N.D.
carbon source
Thymine 0.793 mM (C)
-0.1
-0.1
N.D.
-0.2
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.3
-0.2
N.D.
-0.1
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.2
-0.3
N.D.
+0.0
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.3
-0.1
N.D.
-0.0
N.D.
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.2
N.D.
-0.1
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.2
N.D.
-0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.4
N.D.
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.2
N.D.
-0.1
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.0
-0.4
N.D.
+0.2
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.1
N.D.
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.2
N.D.
+0.1
N.D.
carbon source
Adenine 0.74 mM (C)
-0.0
-0.1
N.D.
-0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
N.D.
-0.1
N.D.
carbon source
Thymine 0.793 mM (C)
-0.2
-0.0
N.D.
+0.0
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.2
+0.0
N.D.
+0.0
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.0
N.D.
-0.0
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.1
N.D.
+0.0
N.D.
carbon source
Thymine 0.793 mM (C)
-0.1
+0.2
N.D.
+0.0
N.D.
carbon source
Xanthine 0.6574 mM (C)
+0.1
+0.0
N.D.
+0.1
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.1
+0.2
N.D.
-0.0
N.D.
carbon source
D-Glucose (C); 20C
+0.1
+0.1
N.D.
-0.0
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
+0.4
N.D.
+0.0
N.D.
carbon source
Tween 20 (C), 20C
+0.1
+0.2
N.D.
+0.0
N.D.
carbon source
Tween 20 (C), 30C
-0.0
+0.7
N.D.
-0.1
N.D.
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