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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS09915 and A4249_RS09920 are separated by 79 nucleotides
A4249_RS09920 and A4249_RS09925 overlap by 1 nucleotides
A4249_RS09925 and A4249_RS09930 are separated by 3 nucleotides
A4249_RS09930 and A4249_RS09935 are separated by 132 nucleotides
A4249_RS09915: A4249_RS09915 - catalase, at 1,978,793 to 1,980,879
_RS09915
A4249_RS09920: A4249_RS09920 - TolC family protein, at 1,980,959 to 1,982,392
_RS09920
A4249_RS09925: A4249_RS09925 - multidrug efflux RND transporter permease subunit, at 1,982,392 to 1,985,670
_RS09925
A4249_RS09930: A4249_RS09930 - efflux RND transporter periplasmic adaptor subunit, at 1,985,674 to 1,986,876
_RS09930
A4249_RS09935: A4249_RS09935 - TetR/AcrR family transcriptional regulator, at 1,987,009 to 1,987,614
_RS09935
Group
Condition
A4249
_RS09915
A4249
_RS09920
A4249
_RS09925
A4249
_RS09930
A4249
_RS09935
carbon source
Tween 20 (C), 30C
+0.0
-2.3
-2.3
-2.5
N.D.
carbon source
Tween 20 (C), 20C
+0.0
-1.5
-1.5
-1.6
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.0
-0.1
-0.2
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.2
-0.2
-0.1
+0.0
N.D.
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.2
-0.0
-0.1
N.D.
carbon source
Thymine 0.793 mM (C)
-0.1
-0.0
-0.0
-0.2
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.2
-0.0
-0.0
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.2
-0.1
-0.1
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.0
-0.2
-0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
-0.1
-0.1
-0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.1
-0.1
-0.0
-0.1
N.D.
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.1
-0.1
-0.0
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.1
-0.1
-0.0
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.1
+0.0
-0.2
N.D.
carbon source
Adenine 0.74 mM (C)
-0.0
-0.1
-0.1
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.0
-0.1
-0.1
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.1
+0.1
-0.0
-0.2
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.1
-0.1
+0.0
N.D.
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.0
-0.1
-0.0
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.1
-0.1
+0.0
N.D.
carbon source
Thymine 0.793 mM (C)
+0.0
-0.1
-0.1
-0.0
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.0
-0.1
-0.0
-0.1
N.D.
carbon source
Cytidine 0.41115 mM (C)
+0.0
-0.0
-0.1
-0.1
N.D.
carbon source
Thymine 0.793 mM (C)
-0.1
-0.0
-0.1
+0.0
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.1
-0.0
-0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.0
+0.0
-0.0
-0.1
N.D.
carbon source
D-Glucose (C); 20C
+0.0
+0.1
-0.0
-0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.0
-0.1
+0.2
N.D.
carbon source
D-Glucose (C); 30C
-0.1
+0.1
+0.2
-0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.0
+0.1
+0.1
N.D.
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