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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS09830 and A4249_RS09835 are separated by 85 nucleotides
A4249_RS09835 and A4249_RS09840 overlap by 4 nucleotides
A4249_RS09840 and A4249_RS09845 are separated by 17 nucleotides
A4249_RS09845 and A4249_RS09850 are separated by 73 nucleotides
A4249_RS09830: A4249_RS09830 - ATP-binding protein, at 1,958,809 to 1,960,176
_RS09830
A4249_RS09835: A4249_RS09835 - hypothetical protein, at 1,960,262 to 1,960,738
_RS09835
A4249_RS09840: A4249_RS09840 - pyrroline-5-carboxylate reductase dimerization domain-containing protein, at 1,960,735 to 1,961,523
_RS09840
A4249_RS09845: A4249_RS09845 - YbjN domain-containing protein, at 1,961,541 to 1,962,044
_RS09845
A4249_RS09850: A4249_RS09850 - accessory factor UbiK family protein, at 1,962,118 to 1,962,405
_RS09850
Group
Condition
A4249
_RS09830
A4249
_RS09835
A4249
_RS09840
A4249
_RS09845
A4249
_RS09850
carbon source
Tween 20 (C), 30C
-0.4
-0.0
-4.5
N.D.
N.D.
carbon source
D-Glucose (C); 30C
-0.6
-0.2
-3.7
N.D.
N.D.
carbon source
D-Glucose (C); 20C
+0.1
+0.1
-4.7
N.D.
N.D.
carbon source
Tween 20 (C), 20C
-1.3
+0.1
-2.9
N.D.
N.D.
carbon source
Cytidine 0.41115 mM (C)
-0.9
+0.0
-0.7
N.D.
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.7
-0.0
-0.7
N.D.
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.4
-0.2
-0.3
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.3
-0.3
-0.1
N.D.
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.2
-0.2
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.4
+0.0
-0.1
N.D.
N.D.
carbon source
Uracil 0.8921 mM (C)
-0.3
-0.1
-0.0
N.D.
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.6
+0.1
+0.0
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.1
-0.2
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.2
-0.1
N.D.
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.2
-0.0
-0.1
N.D.
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.0
-0.1
N.D.
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.1
-0.1
-0.1
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
+0.1
-0.2
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.1
-0.2
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
-0.2
+0.1
+0.1
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
+0.1
+0.0
N.D.
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.2
-0.4
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
-0.2
+0.5
N.D.
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.0
-0.1
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.0
+0.2
N.D.
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.2
+0.2
N.D.
N.D.
carbon source
Xanthine 0.6574 mM (C)
+0.1
-0.0
+0.3
N.D.
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
+0.2
+0.2
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.4
N.D.
N.D.
carbon source
Thymine 0.793 mM (C)
+0.2
+0.1
+0.4
N.D.
N.D.
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