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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS09535 and A4249_RS09540 are separated by 85 nucleotides
A4249_RS09540 and A4249_RS09545 are separated by 121 nucleotides
A4249_RS09545 and A4249_RS09550 overlap by 4 nucleotides
A4249_RS09550 and A4249_RS09555 overlap by 14 nucleotides
A4249_RS09535: A4249_RS09535 - FecR domain-containing protein, at 1,904,682 to 1,905,653
_RS09535
A4249_RS09540: A4249_RS09540 - sigma-70 family RNA polymerase sigma factor, at 1,905,739 to 1,906,302
_RS09540
A4249_RS09545: A4249_RS09545 - thermostable hemolysin, at 1,906,424 to 1,907,110
_RS09545
A4249_RS09550: A4249_RS09550 - AMP-binding protein, at 1,907,107 to 1,908,552
_RS09550
A4249_RS09555: A4249_RS09555 - iron-containing redox enzyme family protein, at 1,908,539 to 1,909,216
_RS09555
Group
Condition
A4249
_RS09535
A4249
_RS09540
A4249
_RS09545
A4249
_RS09550
A4249
_RS09555
carbon source
Tween 20 (C), 30C
-1.4
N.D.
-0.0
+0.1
+0.2
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
-0.0
-0.5
+0.0
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
-0.0
-0.4
-0.1
carbon source
Thymine 0.793 mM (C)
-0.3
N.D.
-0.2
-0.0
+0.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
N.D.
-0.1
-0.3
+0.1
carbon source
Tween 20 (C), 20C
-0.6
N.D.
+0.0
+0.1
+0.1
carbon source
Cytidine 0.41115 mM (C)
-0.3
N.D.
-0.3
+0.3
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.2
N.D.
-0.1
+0.0
+0.1
carbon source
Xanthine 0.6574 mM (C)
-0.0
N.D.
+0.1
-0.3
+0.1
carbon source
Uracil 0.8921 mM (C)
-0.1
N.D.
+0.1
-0.1
+0.0
carbon source
Cytosine 0.9 mM (C)
+0.1
N.D.
+0.0
-0.1
-0.1
carbon source
Inosine 0.3728 mM (C)
+0.1
N.D.
+0.0
-0.2
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.2
N.D.
-0.1
+0.2
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
N.D.
-0.2
-0.1
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
N.D.
-0.0
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.0
N.D.
-0.1
+0.0
+0.0
carbon source
Uracil 0.8921 mM (C)
-0.0
N.D.
+0.1
+0.0
+0.0
carbon source
Adenine 0.74 mM (C)
+0.2
N.D.
+0.0
-0.0
-0.2
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
N.D.
+0.1
+0.0
-0.1
carbon source
Guanine 0.6617 mM (C)
+0.1
N.D.
+0.0
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
+0.1
N.D.
-0.1
+0.1
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.3
N.D.
+0.2
+0.3
-0.0
carbon source
D-Glucose (C); 20C
-0.3
N.D.
+0.1
+0.2
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.4
N.D.
-0.0
-0.1
-0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
N.D.
+0.1
+0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.0
N.D.
+0.2
-0.0
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.2
N.D.
-0.0
+0.1
+0.1
carbon source
Guanine 0.6617 mM (C)
+0.3
N.D.
+0.1
-0.2
+0.1
carbon source
D-Glucose (C); 30C
+0.2
N.D.
+0.1
+0.2
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.4
N.D.
+0.0
+0.3
-0.1
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