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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS09105 and A4249_RS09110 are separated by 96 nucleotides
A4249_RS09110 and A4249_RS09115 are separated by 106 nucleotides
A4249_RS09115 and A4249_RS16940 are separated by 220 nucleotides
A4249_RS16940 and A4249_RS09120 are separated by 128 nucleotides
A4249_RS09105: A4249_RS09105 - M3 family oligoendopeptidase, at 1,821,458 to 1,823,251
_RS09105
A4249_RS09110: A4249_RS09110 - DUF4153 domain-containing protein, at 1,823,348 to 1,825,117
_RS09110
A4249_RS09115: A4249_RS09115 - sigma-54 dependent transcriptional regulator, at 1,825,224 to 1,826,675
_RS09115
A4249_RS16940: A4249_RS16940 - GIY-YIG nuclease family protein, at 1,826,896 to 1,826,994
_RS16940
A4249_RS09120: A4249_RS09120 - hypothetical protein, at 1,827,123 to 1,827,503
_RS09120
Group
Condition
A4249
_RS09105
A4249
_RS09110
A4249
_RS09115
A4249
_RS16940
A4249
_RS09120
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
-0.1
-0.5
-0.6
+0.1
carbon source
D-Glucose (C); 20C
+0.2
-0.2
-0.0
-0.2
-0.6
carbon source
Adenine 0.74 mM (C)
-0.0
-0.1
+0.0
-0.4
-0.1
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.0
-0.5
-0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.0
-0.4
-0.1
+0.2
carbon source
Uracil 0.8921 mM (C)
-0.0
+0.0
-0.2
-0.1
+0.1
carbon source
Thymine 0.793 mM (C)
+0.1
+0.1
+0.0
-0.2
-0.1
carbon source
Guanine 0.6617 mM (C)
+0.0
+0.0
+0.4
-0.5
+0.0
carbon source
Inosine 0.3728 mM (C)
-0.2
+0.1
-0.7
+0.4
+0.3
carbon source
Cytosine 0.9 mM (C)
-0.0
-0.0
+0.4
-0.2
-0.1
carbon source
Adenine 0.74 mM (C)
+0.0
+0.1
-0.2
+0.1
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.1
+0.4
-0.3
+0.1
carbon source
Cytosine 0.9 mM (C)
-0.0
-0.0
+0.3
-0.2
+0.2
carbon source
Uracil 0.8921 mM (C)
-0.1
+0.1
+0.0
-0.0
+0.3
carbon source
D-Glucose (C); 30C
+0.6
-0.0
-0.9
+0.4
+0.1
carbon source
Tween 20 (C), 30C
+0.3
-0.2
+0.0
-0.0
+0.2
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.0
+0.1
-0.2
+0.3
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
+0.0
+0.3
-0.1
+0.2
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.0
+0.4
+0.3
-0.1
carbon source
Cytidine 0.41115 mM (C)
-0.1
-0.0
+0.2
-0.1
+0.4
carbon source
Adenine 0.74 mM (C)
+0.0
+0.0
+0.0
-0.0
+0.4
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
-0.2
+0.4
+0.4
-0.1
carbon source
Thymine 0.793 mM (C)
+0.0
-0.0
+0.5
-0.3
+0.3
carbon source
Thymine 0.793 mM (C)
+0.2
+0.1
+0.2
+0.1
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.0
+0.1
+0.3
-0.1
+0.5
carbon source
Xanthine 0.6574 mM (C)
-0.0
+0.1
+0.4
+0.1
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.1
+0.8
-0.2
+0.3
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.1
+0.3
+0.2
+0.5
carbon source
Tween 20 (C), 20C
+0.2
+0.0
+0.3
+0.5
-0.2
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.1
+0.3
+0.3
+0.6
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