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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS08600 and A4249_RS08605 are separated by 228 nucleotides
A4249_RS08605 and A4249_RS08610 overlap by 1 nucleotides
A4249_RS08610 and A4249_RS08615 are separated by 66 nucleotides
A4249_RS08615 and A4249_RS08620 overlap by 4 nucleotides
A4249_RS08600: A4249_RS08600 - ABC transporter permease, at 1,724,327 to 1,725,442
_RS08600
A4249_RS08605: A4249_RS08605 - UdgX family uracil-DNA binding protein, at 1,725,671 to 1,727,125
_RS08605
A4249_RS08610: A4249_RS08610 - putative DNA modification/repair radical SAM protein, at 1,727,125 to 1,728,363
_RS08610
A4249_RS08615: A4249_RS08615 - flagellin, at 1,728,430 to 1,729,395
_RS08615
A4249_RS08620: A4249_RS08620 - flagellar hook-associated protein FlgK, at 1,729,392 to 1,731,491
_RS08620
Group
Condition
A4249
_RS08600
A4249
_RS08605
A4249
_RS08610
A4249
_RS08615
A4249
_RS08620
carbon source
D-Glucose (C); 30C
-3.3
+0.1
+0.1
-0.2
-0.1
carbon source
Tween 20 (C), 20C
-3.0
+0.1
+0.1
-0.2
+0.1
carbon source
Tween 20 (C), 30C
-2.7
+0.2
-0.0
-0.3
+0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.3
+0.1
-0.1
-0.1
+0.0
carbon source
Xanthine 0.6574 mM (C)
+0.1
-0.2
+0.0
-0.2
+0.0
carbon source
Uracil 0.8921 mM (C)
+0.2
-0.1
-0.2
-0.1
+0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.1
-0.0
-0.1
+0.0
carbon source
Xanthine 0.6574 mM (C)
-0.2
-0.0
+0.0
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
+0.1
+0.0
-0.0
-0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
-0.0
-0.1
+0.1
+0.1
carbon source
Thymine 0.793 mM (C)
-0.1
-0.1
+0.0
+0.0
+0.1
carbon source
Uracil 0.8921 mM (C)
+0.0
-0.0
-0.1
-0.0
+0.1
carbon source
Cytidine 0.41115 mM (C)
+0.2
-0.1
-0.1
-0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.1
-0.1
+0.1
-0.0
carbon source
Adenine 0.74 mM (C)
+0.4
-0.1
-0.1
-0.1
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.2
+0.0
+0.1
-0.2
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
-0.1
+0.1
+0.1
+0.2
carbon source
Adenine 0.74 mM (C)
+0.0
+0.0
+0.1
+0.0
-0.0
carbon source
Guanine 0.6617 mM (C)
+0.3
+0.0
-0.0
-0.1
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.1
+0.1
+0.0
+0.1
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.4
+0.0
-0.0
-0.2
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.3
-0.1
+0.0
+0.0
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.5
+0.0
-0.1
-0.1
+0.1
carbon source
Adenine 0.74 mM (C)
+0.3
-0.1
+0.1
+0.0
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.4
-0.1
+0.0
-0.0
+0.1
carbon source
Guanosine 0.35306 mM (C)
+0.8
+0.0
-0.1
-0.2
-0.1
carbon source
Guanine 0.6617 mM (C)
+0.5
+0.0
+0.0
-0.0
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.4
-0.0
+0.0
+0.1
+0.1
carbon source
D-Glucose (C); 20C
-1.3
+0.1
+0.2
+0.7
+1.1
carbon source
Inosine 0.3728 mM (C)
+1.0
+0.1
+0.1
-0.0
-0.0
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