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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS08415 and A4249_RS08420 overlap by 4 nucleotides
A4249_RS08420 and A4249_RS08425 are separated by 2 nucleotides
A4249_RS08425 and A4249_RS08430 are separated by 196 nucleotides
A4249_RS08430 and A4249_RS08440 are separated by 378 nucleotides
A4249_RS08415: A4249_RS08415 - PA0069 family radical SAM protein, at 1,689,024 to 1,690,088
_RS08415
A4249_RS08420: A4249_RS08420 - hypothetical protein, at 1,690,085 to 1,690,480
_RS08420
A4249_RS08425: A4249_RS08425 - class I SAM-dependent RNA methyltransferase, at 1,690,483 to 1,691,727
_RS08425
A4249_RS08430: A4249_RS08430 - glycine zipper 2TM domain-containing protein, at 1,691,924 to 1,692,586
_RS08430
A4249_RS08440: A4249_RS08440 - TlyA family RNA methyltransferase, at 1,692,965 to 1,693,696
_RS08440
Group
Condition
A4249
_RS08415
A4249
_RS08420
A4249
_RS08425
A4249
_RS08430
A4249
_RS08440
carbon source
Xanthine 0.6574 mM (C)
-0.1
N.D.
+0.1
-0.0
-0.5
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.1
N.D.
-0.5
+0.0
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
N.D.
-0.2
+0.1
-0.3
carbon source
Guanine 0.6617 mM (C)
-0.1
N.D.
-0.1
+0.0
-0.2
carbon source
Inosine 0.3728 mM (C)
-0.1
N.D.
-0.2
+0.0
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
N.D.
+0.0
+0.0
-0.1
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
-0.0
-0.1
+0.2
carbon source
Tween 20 (C), 20C
-0.1
N.D.
-0.4
-0.1
+0.5
carbon source
Cytosine 0.9 mM (C)
+0.0
N.D.
-0.2
-0.1
+0.3
carbon source
Thymine 0.793 mM (C)
-0.0
N.D.
+0.2
-0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
-0.0
N.D.
+0.0
+0.0
+0.3
carbon source
D-Glucose (C); 30C
-0.0
N.D.
-0.2
+0.1
+0.5
carbon source
Uracil 0.8921 mM (C)
-0.1
N.D.
+0.3
-0.0
+0.1
carbon source
D-Glucose (C); 20C
-0.1
N.D.
-0.4
-0.1
+0.8
carbon source
Guanine 0.6617 mM (C)
-0.1
N.D.
+0.3
-0.1
+0.3
carbon source
Uracil 0.8921 mM (C)
-0.1
N.D.
+0.3
-0.0
+0.4
carbon source
Cytosine 0.9 mM (C)
-0.1
N.D.
-0.0
-0.0
+0.7
carbon source
Inosine 0.3728 mM (C)
-0.1
N.D.
+0.1
-0.0
+0.6
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
+0.1
-0.1
+0.7
carbon source
Tween 20 (C), 30C
+0.0
N.D.
-0.2
-0.0
+0.9
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.0
N.D.
+0.1
+0.0
+0.5
carbon source
Thymine 0.793 mM (C)
-0.1
N.D.
+0.0
-0.0
+0.9
carbon source
Guanosine 0.35306 mM (C)
-0.2
N.D.
+0.5
-0.1
+0.5
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
N.D.
+0.2
-0.0
+0.6
carbon source
Cytidine 0.41115 mM (C)
-0.0
N.D.
+0.6
+0.0
+0.2
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
+0.1
+0.0
+0.8
carbon source
Xanthine 0.6574 mM (C)
-0.0
N.D.
+0.1
-0.1
+0.9
carbon source
Guanosine 0.35306 mM (C)
-0.1
N.D.
-0.2
-0.1
+1.3
carbon source
Thymine 0.793 mM (C)
+0.0
N.D.
-0.1
-0.0
+1.2
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
N.D.
+0.1
-0.0
+1.1
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