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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS08400 and A4249_RS08405 are separated by 61 nucleotides
A4249_RS08405 and A4249_RS08410 are separated by 275 nucleotides
A4249_RS08410 and A4249_RS08415 are separated by 62 nucleotides
A4249_RS08415 and A4249_RS08420 overlap by 4 nucleotides
A4249_RS08400: A4249_RS08400 - nuclear transport factor 2 family protein, at 1,686,169 to 1,686,642
_RS08400
A4249_RS08405: A4249_RS08405 - TIGR01841 family phasin, at 1,686,704 to 1,687,195
_RS08405
A4249_RS08410: A4249_RS08410 - D-alanyl-D-alanine carboxypeptidase family protein, at 1,687,471 to 1,688,961
_RS08410
A4249_RS08415: A4249_RS08415 - PA0069 family radical SAM protein, at 1,689,024 to 1,690,088
_RS08415
A4249_RS08420: A4249_RS08420 - hypothetical protein, at 1,690,085 to 1,690,480
_RS08420
Group
Condition
A4249
_RS08400
A4249
_RS08405
A4249
_RS08410
A4249
_RS08415
A4249
_RS08420
carbon source
Tween 20 (C), 30C
-0.2
-0.3
-2.7
+0.0
N.D.
carbon source
D-Glucose (C); 30C
-0.2
-1.5
-0.8
-0.0
N.D.
carbon source
Tween 20 (C), 20C
-0.1
+0.1
-2.1
-0.1
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.1
-1.0
-0.1
+0.0
N.D.
carbon source
Cytidine 0.41115 mM (C)
-0.1
-0.5
-0.1
-0.0
N.D.
carbon source
D-Glucose (C); 20C
+0.0
-0.5
-0.2
-0.1
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.6
+0.0
-0.1
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.2
-0.6
-0.1
-0.1
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.3
-0.0
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.2
+0.0
-0.2
N.D.
carbon source
Thymine 0.793 mM (C)
+0.1
-0.4
+0.0
-0.0
N.D.
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.2
+0.1
-0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
-0.1
+0.0
+0.0
N.D.
carbon source
Thymine 0.793 mM (C)
+0.0
-0.1
+0.0
-0.1
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.2
-0.2
-0.0
-0.1
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.1
-0.1
-0.1
-0.1
N.D.
carbon source
Adenine 0.74 mM (C)
+0.1
-0.1
-0.0
-0.1
N.D.
carbon source
Adenine 0.74 mM (C)
+0.1
-0.1
-0.0
-0.1
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.0
-0.1
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.1
-0.1
+0.1
-0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.1
-0.2
+0.1
-0.0
N.D.
carbon source
Inosine 0.3728 mM (C)
-0.1
+0.2
-0.0
-0.1
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.0
-0.0
-0.1
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.1
+0.1
-0.1
N.D.
carbon source
Thymine 0.793 mM (C)
+0.2
-0.2
+0.0
+0.0
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.2
-0.0
+0.0
-0.0
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.1
-0.1
+0.0
N.D.
carbon source
Xanthine 0.6574 mM (C)
+0.0
+0.2
+0.0
-0.0
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.2
+0.1
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.3
+0.0
-0.1
N.D.
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