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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS07850 and A4249_RS07855 overlap by 4 nucleotides
A4249_RS07855 and A4249_RS07860 are separated by 17 nucleotides
A4249_RS07860 and A4249_RS07865 overlap by 4 nucleotides
A4249_RS07865 and A4249_RS07870 overlap by 4 nucleotides
A4249_RS07850: A4249_RS07850 - pseudouridine synthase, at 1,570,792 to 1,571,571
_RS07850
A4249_RS07855: A4249_RS07855 - ATPase, at 1,571,568 to 1,572,320
_RS07855
A4249_RS07860: A4249_RS07860 - putative 2OG-Fe(II) oxygenase, at 1,572,338 to 1,573,822
_RS07860
A4249_RS07865: A4249_RS07865 - RluA family pseudouridine synthase, at 1,573,819 to 1,574,844
_RS07865
A4249_RS07870: A4249_RS07870 - fluoride efflux transporter CrcB, at 1,574,841 to 1,575,236
_RS07870
Group
Condition
A4249
_RS07850
A4249
_RS07855
A4249
_RS07860
A4249
_RS07865
A4249
_RS07870
carbon source
D-Glucose (C); 20C
-0.1
N.D.
-0.1
-1.1
+0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
N.D.
-0.1
-0.6
-0.2
carbon source
D-Glucose (C); 30C
-0.2
N.D.
-0.0
-0.8
+0.2
carbon source
Tween 20 (C), 30C
-0.3
N.D.
-0.1
-0.2
-0.1
carbon source
Guanine 0.6617 mM (C)
-0.2
N.D.
+0.2
-0.1
-0.4
carbon source
Guanosine 0.35306 mM (C)
+0.0
N.D.
+0.0
-0.6
+0.1
carbon source
Tween 20 (C), 20C
-0.1
N.D.
-0.1
-0.3
+0.1
carbon source
Cytidine 0.41115 mM (C)
+0.1
N.D.
+0.0
-0.3
-0.2
carbon source
Guanine 0.6617 mM (C)
-0.0
N.D.
+0.0
-0.2
-0.1
carbon source
Guanine 0.6617 mM (C)
-0.0
N.D.
+0.0
-0.3
+0.2
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
N.D.
-0.1
-0.2
+0.1
carbon source
Cytosine 0.9 mM (C)
-0.0
N.D.
+0.1
-0.2
+0.0
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
+0.1
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.1
N.D.
+0.1
-0.1
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.0
N.D.
+0.1
-0.1
-0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
N.D.
+0.1
-0.1
+0.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
N.D.
+0.1
-0.1
+0.1
carbon source
Uracil 0.8921 mM (C)
+0.1
N.D.
+0.2
-0.2
+0.0
carbon source
Inosine 0.3728 mM (C)
-0.1
N.D.
+0.1
+0.1
+0.1
carbon source
Adenine 0.74 mM (C)
+0.1
N.D.
+0.1
+0.1
-0.1
carbon source
Thymine 0.793 mM (C)
-0.2
N.D.
+0.1
+0.2
+0.1
carbon source
Guanosine 0.35306 mM (C)
+0.0
N.D.
+0.1
+0.2
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.1
N.D.
+0.1
+0.1
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.2
N.D.
-0.0
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
N.D.
+0.1
+0.5
-0.0
carbon source
Thymine 0.793 mM (C)
+0.2
N.D.
+0.1
+0.1
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
N.D.
+0.1
+0.2
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
N.D.
+0.1
+0.3
+0.1
carbon source
Uracil 0.8921 mM (C)
+0.0
N.D.
+0.1
+0.2
+0.2
carbon source
Inosine 0.3728 mM (C)
+0.2
N.D.
+0.1
+0.7
-0.0
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