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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS06610 and A4249_RS06615 overlap by 4 nucleotides
A4249_RS06615 and A4249_RS06620 are separated by 77 nucleotides
A4249_RS06620 and A4249_RS06625 overlap by 4 nucleotides
A4249_RS06625 and A4249_RS06630 are separated by 3 nucleotides
A4249_RS06610: A4249_RS06610 - histidine utilization repressor, at 1,345,340 to 1,346,065
_RS06610
A4249_RS06615: A4249_RS06615 - formimidoylglutamate deiminase, at 1,346,062 to 1,347,438
_RS06615
A4249_RS06620: A4249_RS06620 - N-formylglutamate deformylase, at 1,347,516 to 1,348,334
_RS06620
A4249_RS06625: A4249_RS06625 - urocanate hydratase, at 1,348,331 to 1,349,995
_RS06625
A4249_RS06630: A4249_RS06630 - histidine ammonia-lyase, at 1,349,999 to 1,351,528
_RS06630
Group
Condition
A4249
_RS06610
A4249
_RS06615
A4249
_RS06620
A4249
_RS06625
A4249
_RS06630
carbon source
Cytidine 0.41115 mM (C)
-0.4
+0.0
-0.0
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
+0.0
-0.5
+0.1
-0.0
carbon source
Inosine 0.3728 mM (C)
-0.2
+0.1
-0.1
+0.1
-0.2
carbon source
Adenine 0.74 mM (C)
-0.1
+0.0
-0.2
+0.0
+0.0
carbon source
Adenine 0.74 mM (C)
-0.1
+0.0
+0.0
+0.1
-0.3
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.0
-0.1
+0.1
-0.0
carbon source
Xanthine 0.6574 mM (C)
-0.0
+0.1
+0.1
+0.1
-0.3
carbon source
Uracil 0.8921 mM (C)
+0.0
-0.0
-0.0
+0.1
-0.1
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
-0.0
-0.0
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
-0.1
+0.1
+0.0
+0.1
carbon source
Uracil 0.8921 mM (C)
-0.2
-0.1
+0.0
+0.1
+0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.2
+0.0
+0.1
-0.0
-0.2
carbon source
D-Glucose (C); 20C
-0.1
+0.1
+0.0
-0.0
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.0
-0.1
+0.0
+0.0
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.1
-0.0
+0.1
-0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.1
+0.0
+0.1
+0.1
-0.1
carbon source
Adenine 0.74 mM (C)
-0.0
-0.0
-0.0
+0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.1
+0.1
+0.0
+0.1
+0.0
carbon source
Xanthine 0.6574 mM (C)
-0.0
+0.2
-0.0
+0.1
-0.1
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.1
-0.0
+0.1
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.2
-0.2
+0.1
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.1
-0.1
+0.0
+0.2
carbon source
Cytosine 0.9 mM (C)
-0.0
+0.0
+0.1
+0.0
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
+0.3
+0.1
-0.0
carbon source
D-Glucose (C); 30C
+0.3
-0.2
+0.3
+0.1
-0.2
carbon source
Tween 20 (C), 30C
-0.2
+0.2
+0.1
+0.0
+0.0
carbon source
Thymine 0.793 mM (C)
-0.1
+0.1
+0.0
+0.1
+0.2
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.1
+0.0
+0.1
+0.1
carbon source
Inosine 0.3728 mM (C)
+0.1
+0.1
+0.1
+0.1
-0.0
carbon source
Tween 20 (C), 20C
+0.0
-0.0
+0.3
+0.1
-0.0
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