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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS06535 and A4249_RS06540 overlap by 67 nucleotides
A4249_RS06540 and A4249_RS06545 are separated by 108 nucleotides
A4249_RS06545 and A4249_RS06550 are separated by 40 nucleotides
A4249_RS06550 and A4249_RS06555 are separated by 15 nucleotides
A4249_RS06535: A4249_RS06535 - amidase, at 1,330,547 to 1,332,040
_RS06535
A4249_RS06540: A4249_RS06540 - S9 family peptidase, at 1,331,974 to 1,334,223
_RS06540
A4249_RS06545: A4249_RS06545 - ferredoxin--NADP reductase, at 1,334,332 to 1,335,147
_RS06545
A4249_RS06550: A4249_RS06550 - chorismate mutase, at 1,335,188 to 1,335,520
_RS06550
A4249_RS06555: A4249_RS06555 - Hpt domain-containing protein, at 1,335,536 to 1,335,889
_RS06555
Group
Condition
A4249
_RS06535
A4249
_RS06540
A4249
_RS06545
A4249
_RS06550
A4249
_RS06555
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.1
N.D.
-0.9
-0.1
carbon source
Tween 20 (C), 30C
+0.3
+0.2
N.D.
-1.0
-0.1
carbon source
Cytidine 0.41115 mM (C)
-0.2
-0.1
N.D.
-0.6
+0.4
carbon source
Adenine 0.74 mM (C)
-0.0
-0.0
N.D.
-0.4
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.0
+0.0
N.D.
-0.4
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.0
N.D.
-0.3
+0.2
carbon source
Thymine 0.793 mM (C)
+0.1
+0.0
N.D.
-0.3
-0.2
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.1
N.D.
-0.2
+0.1
carbon source
Guanine 0.6617 mM (C)
+0.1
-0.0
N.D.
-0.3
-0.0
carbon source
Uracil 0.8921 mM (C)
+0.0
-0.0
N.D.
-0.3
+0.2
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
+0.0
N.D.
-0.1
-0.2
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.1
N.D.
-0.1
+0.0
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.0
N.D.
-0.0
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.0
N.D.
-0.4
+0.3
carbon source
Adenine 0.74 mM (C)
+0.0
-0.0
N.D.
-0.2
+0.1
carbon source
Tween 20 (C), 20C
+0.2
+0.2
N.D.
-0.3
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.0
N.D.
-0.2
+0.3
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
N.D.
-0.3
+0.3
carbon source
Adenine 0.74 mM (C)
+0.1
-0.0
N.D.
-0.1
+0.1
carbon source
Guanosine 0.35306 mM (C)
+0.3
-0.0
N.D.
-0.3
+0.1
carbon source
D-Glucose (C); 30C
+0.0
+0.1
N.D.
-0.3
+0.2
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.0
N.D.
+0.1
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.1
N.D.
-0.4
+0.3
carbon source
D-Glucose (C); 20C
+0.1
+0.1
N.D.
-0.3
+0.2
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.0
N.D.
-0.0
+0.2
carbon source
Cytosine 0.9 mM (C)
+0.1
+0.0
N.D.
-0.1
+0.4
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.0
N.D.
+0.0
+0.3
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.0
N.D.
+0.0
+0.4
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.1
N.D.
+0.1
+0.4
carbon source
Thymine 0.793 mM (C)
+0.1
+0.0
N.D.
+0.2
+0.4
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