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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS05895 and A4249_RS05900 are separated by 39 nucleotides
A4249_RS05900 and A4249_RS05905 are separated by 106 nucleotides
A4249_RS05905 and A4249_RS05910 overlap by 4 nucleotides
A4249_RS05910 and A4249_RS05915 overlap by 4 nucleotides
A4249_RS05895: A4249_RS05895 - single-stranded-DNA-specific exonuclease RecJ, at 1,205,609 to 1,207,420
_RS05895
A4249_RS05900: A4249_RS05900 - hypothetical protein, at 1,207,460 to 1,207,885
_RS05900
A4249_RS05905: A4249_RS05905 - class I poly(R)-hydroxyalkanoic acid synthase, at 1,207,992 to 1,209,932
_RS05905
A4249_RS05910: A4249_RS05910 - hypothetical protein, at 1,209,929 to 1,210,306
_RS05910
A4249_RS05915: A4249_RS05915 - peptide-methionine (R)-S-oxide reductase MsrB, at 1,210,303 to 1,210,806
_RS05915
Group
Condition
A4249
_RS05895
A4249
_RS05900
A4249
_RS05905
A4249
_RS05910
A4249
_RS05915
carbon source
Tween 20 (C), 30C
N.D.
-2.4
-0.7
-0.0
+0.4
carbon source
Tween 20 (C), 20C
N.D.
-2.1
-0.6
-0.2
+0.3
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-1.4
+0.1
+0.1
-0.2
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.7
+0.1
-0.2
+0.0
carbon source
D-Glucose (C); 30C
N.D.
-0.9
+0.0
-0.4
+0.4
carbon source
D-Glucose (C); 20C
N.D.
-0.4
-0.0
-0.4
-0.0
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.9
+0.1
-0.0
+0.1
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.5
+0.0
-0.2
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
N.D.
-0.4
-0.0
-0.1
-0.0
carbon source
Cytidine 0.41115 mM (C)
N.D.
-0.4
-0.1
-0.2
+0.1
carbon source
Thymine 0.793 mM (C)
N.D.
-0.4
+0.0
+0.1
-0.2
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.3
+0.1
-0.1
-0.2
carbon source
Uracil 0.8921 mM (C)
N.D.
-0.4
+0.0
+0.1
-0.1
carbon source
Thymine 0.793 mM (C)
N.D.
-0.3
+0.0
+0.1
-0.1
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.5
+0.1
+0.0
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.2
+0.1
+0.0
-0.1
carbon source
Inosine 0.3728 mM (C)
N.D.
+0.1
+0.1
-0.0
-0.4
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.1
-0.0
+0.0
-0.1
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.1
+0.0
-0.0
-0.1
carbon source
Xanthine 0.6574 mM (C)
N.D.
-0.0
+0.1
-0.2
+0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
N.D.
-0.2
-0.1
+0.2
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.2
+0.0
+0.2
+0.1
carbon source
Inosine 0.3728 mM (C)
N.D.
+0.7
+0.0
-0.2
-0.4
carbon source
Adenine 0.74 mM (C)
N.D.
-0.1
+0.1
+0.1
+0.0
carbon source
Adenine 0.74 mM (C)
N.D.
+0.2
+0.0
+0.0
-0.1
carbon source
Guanine 0.6617 mM (C)
N.D.
+0.3
+0.1
+0.0
-0.1
carbon source
Thymine 0.793 mM (C)
N.D.
+0.3
+0.0
+0.2
-0.1
carbon source
Adenine 0.74 mM (C)
N.D.
+0.5
-0.0
-0.0
-0.0
carbon source
Guanine 0.6617 mM (C)
N.D.
+0.5
+0.1
+0.1
-0.1
carbon source
Xanthine 0.6574 mM (C)
N.D.
+0.4
+0.1
+0.1
+0.0
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