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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS16275 and A4249_RS16520 are separated by 237 nucleotides
A4249_RS16520 and A4249_RS05825 are separated by 343 nucleotides
A4249_RS05825 and A4249_RS05830 overlap by 7 nucleotides
A4249_RS05830 and A4249_RS16525 are separated by 1099 nucleotides
A4249_RS16275: A4249_RS16275 - recombinase family protein, at 1,192,810 to 1,193,388
_RS16275
A4249_RS16520: A4249_RS16520 - hypothetical protein, at 1,193,626 to 1,193,784
_RS16520
A4249_RS05825: A4249_RS05825 - DDE-type integrase/transposase/recombinase, at 1,194,128 to 1,195,783
_RS05825
A4249_RS05830: A4249_RS05830 - TniB family NTP-binding protein, at 1,195,777 to 1,196,676
_RS05830
A4249_RS16525: A4249_RS16525 - hypothetical protein, at 1,197,776 to 1,198,123
_RS16525
Group
Condition
A4249
_RS16275
A4249
_RS16520
A4249
_RS05825
A4249
_RS05830
A4249
_RS16525
carbon source
Inosine 0.3728 mM (C)
-0.2
-0.6
+0.0
+0.1
-0.3
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.4
-0.4
+0.1
+0.1
-0.1
carbon source
Tween 20 (C), 30C
-0.1
-0.3
-0.0
-0.0
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
-0.5
+0.1
-0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.4
+0.0
+0.1
+0.0
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.3
-0.1
+0.1
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.2
-0.5
-0.0
+0.0
+0.0
carbon source
Adenine 0.74 mM (C)
-0.2
-0.0
-0.0
-0.0
+0.1
carbon source
Guanosine 0.35306 mM (C)
+0.1
-0.4
+0.2
-0.1
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.1
-0.2
-0.0
+0.0
+0.0
carbon source
Adenine 0.74 mM (C)
+0.0
-0.1
+0.1
-0.1
+0.1
carbon source
D-Glucose (C); 30C
+0.0
+0.2
-0.1
+0.1
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.1
-0.0
+0.0
+0.1
carbon source
Adenine 0.74 mM (C)
+0.1
-0.1
+0.1
+0.0
+0.1
carbon source
Cytidine 0.41115 mM (C)
-0.2
+0.4
-0.1
-0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.2
-0.2
-0.0
+0.0
+0.2
carbon source
Cytosine 0.9 mM (C)
+0.2
-0.1
+0.0
-0.0
+0.1
carbon source
Inosine 0.3728 mM (C)
-0.1
+0.3
-0.0
+0.1
-0.0
carbon source
Thymine 0.793 mM (C)
-0.1
+0.2
+0.0
-0.2
+0.3
carbon source
Tween 20 (C), 20C
+0.0
+0.1
-0.1
+0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.1
-0.0
+0.0
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
+0.1
-0.1
+0.2
-0.0
carbon source
Uracil 0.8921 mM (C)
+0.0
+0.1
-0.1
+0.0
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.0
+0.3
+0.1
-0.0
+0.1
carbon source
Thymine 0.793 mM (C)
+0.1
+0.0
+0.0
-0.0
+0.3
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.1
+0.1
+0.1
+0.2
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.0
+0.1
+0.0
+0.2
carbon source
Thymine 0.793 mM (C)
-0.0
+0.1
-0.0
+0.2
+0.2
carbon source
D-Glucose (C); 20C
-0.0
+0.2
-0.0
+0.1
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.0
+0.1
+0.1
+0.2
+0.1
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A4249_RS05825
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