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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS05440 and A4249_RS05445 are separated by 18 nucleotides
A4249_RS05445 and A4249_RS05450 are separated by 204 nucleotides
A4249_RS05450 and A4249_RS05455 overlap by 4 nucleotides
A4249_RS05455 and A4249_RS05460 overlap by 4 nucleotides
A4249_RS05440: A4249_RS05440 - class I SAM-dependent methyltransferase, at 1,112,341 to 1,113,252
_RS05440
A4249_RS05445: A4249_RS05445 - glycosyltransferase family 2 protein, at 1,113,271 to 1,114,587
_RS05445
A4249_RS05450: A4249_RS05450 - TetR/AcrR family transcriptional regulator, at 1,114,792 to 1,115,421
_RS05450
A4249_RS05455: A4249_RS05455 - ABC transporter substrate-binding protein, at 1,115,418 to 1,116,218
_RS05455
A4249_RS05460: A4249_RS05460 - iron ABC transporter permease, at 1,116,215 to 1,117,204
_RS05460
Group
Condition
A4249
_RS05440
A4249
_RS05445
A4249
_RS05450
A4249
_RS05455
A4249
_RS05460
carbon source
D-Glucose (C); 30C
+0.1
+0.1
-0.4
-3.4
-4.7
carbon source
D-Glucose (C); 20C
+0.0
+0.0
-0.3
-3.4
-4.7
carbon source
Tween 20 (C), 30C
+0.1
+0.2
-0.1
-3.9
-4.2
carbon source
Tween 20 (C), 20C
+0.1
+0.2
-0.3
-3.6
-3.6
carbon source
Inosine 0.3728 mM (C)
+0.0
+0.1
-0.0
-0.5
-0.6
carbon source
Adenine 0.74 mM (C)
-0.0
-0.1
-0.0
-0.0
-0.5
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.0
-0.0
-0.1
-0.4
carbon source
Cytidine 0.41115 mM (C)
-0.0
+0.1
-0.1
-0.2
-0.2
carbon source
Adenine 0.74 mM (C)
-0.1
-0.1
+0.0
-0.0
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.0
+0.1
-0.1
-0.1
-0.2
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.0
+0.1
+0.2
-0.4
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.0
+0.1
-0.0
-0.1
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.0
-0.0
-0.2
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.1
+0.0
-0.0
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
-0.1
+0.1
+0.2
-0.2
carbon source
Inosine 0.3728 mM (C)
-0.2
-0.1
+0.0
+0.3
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.0
+0.1
+0.0
+0.1
-0.2
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.0
+0.1
+0.2
-0.3
carbon source
Uracil 0.8921 mM (C)
-0.0
-0.1
+0.2
+0.0
-0.1
carbon source
Adenine 0.74 mM (C)
-0.0
+0.0
+0.0
-0.0
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.1
-0.0
+0.1
-0.2
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.0
+0.0
+0.2
-0.1
carbon source
Thymine 0.793 mM (C)
+0.0
-0.1
+0.1
+0.2
-0.1
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.0
-0.0
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
-0.2
-0.0
+0.1
+0.3
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.1
+0.1
-0.1
carbon source
Cytosine 0.9 mM (C)
+0.1
+0.0
+0.1
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.1
+0.1
+0.2
+0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
+0.1
+0.1
+0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.0
+0.1
+0.2
+0.2
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