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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS05220 and A4249_RS05225 are separated by 150 nucleotides
A4249_RS05225 and A4249_RS05230 are separated by 110 nucleotides
A4249_RS05230 and A4249_RS05235 overlap by 4 nucleotides
A4249_RS05235 and A4249_RS05240 are separated by 44 nucleotides
A4249_RS05220: A4249_RS05220 - hypothetical protein, at 1,074,737 to 1,075,084
_RS05220
A4249_RS05225: A4249_RS05225 - error-prone DNA polymerase, at 1,075,235 to 1,078,489
_RS05225
A4249_RS05230: A4249_RS05230 - DNA polymerase IV, at 1,078,600 to 1,079,673
_RS05230
A4249_RS05235: A4249_RS05235 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 1,079,670 to 1,080,230
_RS05235
A4249_RS05240: A4249_RS05240 - exodeoxyribonuclease III, at 1,080,275 to 1,081,051
_RS05240
Group
Condition
A4249
_RS05220
A4249
_RS05225
A4249
_RS05230
A4249
_RS05235
A4249
_RS05240
carbon source
Inosine 0.3728 mM (C)
-0.4
-0.1
+0.1
-0.2
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.3
+0.0
+0.0
-0.2
-0.1
carbon source
Uracil 0.8921 mM (C)
-0.2
-0.1
-0.0
-0.1
-0.1
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.1
-0.1
-0.1
-0.1
carbon source
Adenine 0.74 mM (C)
-0.2
+0.0
+0.0
-0.2
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.0
-0.1
-0.1
-0.1
carbon source
Xanthine 0.6574 mM (C)
-0.1
+0.0
-0.0
-0.1
-0.0
carbon source
Cytidine 0.41115 mM (C)
+0.0
+0.0
-0.3
+0.0
+0.0
carbon source
Tween 20 (C), 20C
+0.0
+0.0
-0.0
-0.1
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.2
-0.0
+0.1
-0.1
+0.0
carbon source
Adenine 0.74 mM (C)
-0.1
-0.0
+0.0
-0.1
+0.0
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.1
-0.0
-0.2
+0.0
carbon source
Uracil 0.8921 mM (C)
-0.1
+0.0
-0.1
-0.0
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.0
-0.0
-0.1
+0.1
carbon source
D-Glucose (C); 30C
+0.1
+0.1
-0.0
-0.1
-0.2
carbon source
D-Glucose (C); 20C
+0.0
-0.1
-0.0
+0.1
-0.1
carbon source
Adenine 0.74 mM (C)
-0.1
+0.0
+0.2
-0.1
+0.0
carbon source
Thymine 0.793 mM (C)
-0.0
+0.1
+0.0
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
-0.0
+0.1
-0.1
+0.1
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.1
-0.1
-0.1
-0.0
carbon source
Thymine 0.793 mM (C)
+0.1
+0.0
-0.1
+0.0
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.1
+0.0
-0.2
+0.1
carbon source
Thymine 0.793 mM (C)
-0.0
+0.1
+0.1
-0.1
-0.0
carbon source
Tween 20 (C), 30C
+0.2
-0.1
-0.0
+0.0
-0.0
carbon source
Guanosine 0.35306 mM (C)
+0.2
-0.0
-0.2
+0.0
+0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
+0.1
-0.1
-0.1
+0.0
carbon source
Inosine 0.3728 mM (C)
-0.2
+0.0
+0.1
+0.2
+0.0
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.0
+0.1
-0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.1
+0.2
+0.0
-0.0
carbon source
Guanine 0.6617 mM (C)
+0.2
-0.0
+0.1
-0.1
-0.0
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A4249_RS05230
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