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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS04950 and A4249_RS04955 are separated by 61 nucleotides
A4249_RS04955 and A4249_RS04960 are separated by 33 nucleotides
A4249_RS04960 and A4249_RS04970 are separated by 377 nucleotides
A4249_RS04970 and A4249_RS04975 overlap by 4 nucleotides
A4249_RS04950: A4249_RS04950 - dihydrolipoyl dehydrogenase, at 1,028,809 to 1,030,215
_RS04950
A4249_RS04955: A4249_RS04955 - DUF3606 domain-containing protein, at 1,030,277 to 1,030,459
_RS04955
A4249_RS04960: A4249_RS04960 - UvrD-helicase domain-containing protein, at 1,030,493 to 1,032,847
_RS04960
A4249_RS04970: A4249_RS04970 - ribbon-helix-helix domain-containing protein, at 1,033,225 to 1,033,449
_RS04970
A4249_RS04975: A4249_RS04975 - YbaY family lipoprotein, at 1,033,446 to 1,033,853
_RS04975
Group
Condition
A4249
_RS04950
A4249
_RS04955
A4249
_RS04960
A4249
_RS04970
A4249
_RS04975
carbon source
Tween 20 (C), 20C
N.D.
-0.2
-1.0
N.D.
-0.2
carbon source
Inosine 0.3728 mM (C)
N.D.
-0.4
-0.5
N.D.
+0.0
carbon source
D-Glucose (C); 30C
N.D.
+0.1
-0.2
N.D.
-0.6
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
N.D.
+0.2
-0.6
N.D.
-0.1
carbon source
D-Glucose (C); 20C
N.D.
-0.1
-0.3
N.D.
-0.1
carbon source
Tween 20 (C), 30C
N.D.
-0.3
-0.1
N.D.
-0.1
carbon source
Xanthine 0.6574 mM (C)
N.D.
-0.3
+0.1
N.D.
-0.3
carbon source
Xanthine 0.6574 mM (C)
N.D.
-0.3
+0.1
N.D.
-0.2
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.2
+0.1
N.D.
-0.4
carbon source
Uracil 0.8921 mM (C)
N.D.
+0.2
-0.6
N.D.
+0.0
carbon source
Adenine 0.74 mM (C)
N.D.
-0.3
-0.0
N.D.
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.1
-0.1
N.D.
-0.0
carbon source
Adenine 0.74 mM (C)
N.D.
-0.3
-0.0
N.D.
+0.1
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.0
-0.3
N.D.
+0.1
carbon source
Guanine 0.6617 mM (C)
N.D.
-0.2
+0.1
N.D.
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.2
+0.0
N.D.
-0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
N.D.
+0.1
-0.6
N.D.
+0.4
carbon source
Guanosine 0.35306 mM (C)
N.D.
-0.1
+0.0
N.D.
-0.0
carbon source
Cytidine 0.41115 mM (C)
N.D.
-0.1
-0.1
N.D.
+0.1
carbon source
Uracil 0.8921 mM (C)
N.D.
+0.1
-0.3
N.D.
+0.1
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.2
+0.0
N.D.
+0.1
carbon source
Cytosine 0.9 mM (C)
N.D.
+0.2
-0.1
N.D.
-0.1
carbon source
Thymine 0.793 mM (C)
N.D.
-0.1
+0.0
N.D.
+0.1
carbon source
Inosine 0.3728 mM (C)
N.D.
-0.2
+0.2
N.D.
+0.0
carbon source
Guanosine 0.35306 mM (C)
N.D.
+0.3
-0.5
N.D.
+0.2
carbon source
Hypoxanthine 0.7347 mM (C)
N.D.
-0.2
+0.2
N.D.
+0.0
carbon source
Cytosine 0.9 mM (C)
N.D.
-0.3
+0.3
N.D.
+0.0
carbon source
Guanine 0.6617 mM (C)
N.D.
+0.0
+0.3
N.D.
-0.2
carbon source
Thymine 0.793 mM (C)
N.D.
-0.2
+0.3
N.D.
+0.0
carbon source
Thymine 0.793 mM (C)
N.D.
+0.1
+0.3
N.D.
+0.1
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