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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS04470 and A4249_RS04475 overlap by 11 nucleotides
A4249_RS04475 and A4249_RS04480 overlap by 4 nucleotides
A4249_RS04480 and A4249_RS04485 are separated by 108 nucleotides
A4249_RS04485 and A4249_RS04490 are separated by 618 nucleotides
A4249_RS04470: A4249_RS04470 - ATP-binding protein, at 929,411 to 930,742
_RS04470
A4249_RS04475: A4249_RS04475 - response regulator transcription factor, at 930,732 to 931,268
_RS04475
A4249_RS04480: A4249_RS04480 - HIT family protein, at 931,265 to 931,702
_RS04480
A4249_RS04485: A4249_RS04485 - phage holin family protein, at 931,811 to 932,167
_RS04485
A4249_RS04490: A4249_RS04490 - cobaltochelatase subunit CobS, at 932,786 to 933,790
_RS04490
Group
Condition
A4249
_RS04470
A4249
_RS04475
A4249
_RS04480
A4249
_RS04485
A4249
_RS04490
carbon source
Tween 20 (C), 30C
+0.5
-1.8
-2.2
-0.6
-2.5
carbon source
Tween 20 (C), 20C
+0.1
-1.8
-1.8
-0.3
-1.6
carbon source
D-Glucose (C); 20C
+0.1
-1.1
+0.0
-1.2
-0.5
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.5
+0.8
-1.9
-1.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.6
-0.2
-0.2
-0.9
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.3
+0.3
-1.2
-0.7
carbon source
Inosine 0.3728 mM (C)
+0.1
-1.8
+0.4
+0.6
-1.1
carbon source
Cytidine 0.41115 mM (C)
+0.0
-1.5
+0.1
+1.3
-1.6
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
-1.4
+0.4
+0.5
-1.1
carbon source
Guanosine 0.35306 mM (C)
+0.0
-1.0
+0.9
-0.4
-0.9
carbon source
Xanthine 0.6574 mM (C)
+0.1
-0.9
+0.2
+0.0
-0.6
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.2
-1.5
+0.2
+0.5
-0.4
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.9
+0.1
-0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.8
+0.6
+0.2
-0.6
carbon source
D-Glucose (C); 30C
+0.6
+0.6
-0.2
+0.4
-1.8
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.1
+0.1
-0.4
-0.4
+0.2
carbon source
Thymine 0.793 mM (C)
-0.0
-0.9
+0.5
+0.0
+0.1
carbon source
Adenine 0.74 mM (C)
+0.2
-0.6
+0.1
+0.6
-0.3
carbon source
Thymine 0.793 mM (C)
+0.2
-0.3
+0.1
+0.4
-0.4
carbon source
Adenine 0.74 mM (C)
+0.1
-0.4
+0.3
+0.4
-0.3
carbon source
Uracil 0.8921 mM (C)
-0.0
+0.1
-0.0
-0.2
+0.5
carbon source
Cytosine 0.9 mM (C)
-0.0
+0.5
+0.1
+0.0
-0.1
carbon source
Adenine 0.74 mM (C)
+0.2
-0.2
+0.6
-0.5
+0.4
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-1.3
+0.4
+0.9
+0.6
carbon source
Thymine 0.793 mM (C)
+0.1
-0.0
+0.3
+0.4
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.0
+0.3
+0.5
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.6
+0.3
+0.4
+0.0
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.7
+1.0
+1.3
+0.0
carbon source
Uracil 0.8921 mM (C)
+0.2
-0.1
+0.3
+0.7
+0.6
carbon source
Guanosine 0.35306 mM (C)
+0.0
+0.5
+0.4
+0.7
+0.6
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